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Syap1 Gene Detail
Summary
  • Symbol
    Syap1
  • Name
    synapse associated protein 1
  • Synonyms
    2010110O17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914293
    NCBI Gene: 67043
  • Gene Overview
    MyGene.info: SYAP1
Location & Maps
more
  • Sequence Map
    ChrX:162857057-162888447 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      31391 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 75.06 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SYAP1, synapse associated protein 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SYAP1, synapse associated protein 1
    Orthology source: HomoloGene
  • Synonyms
    PRO3113
  • Links
    NCBI Gene ID: 94056
    neXtProt AC: NX_Q96A49

  • Chr Location
    Xp22.2; chrX:16719584-16762684 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 12078
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: SYAP1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    1 images
    7 phenotype references
  • All Mutations and Alleles
    11
  • Gene trapped
    8
  • Targeted
    3
Male chimeras hemizygous for a gene trapped allele appear normal at E9.5.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019495 VEGA Gene Model | MGI Sequence Detail 31391 C57BL/6J ±  kb
transcript OTTMUST00000046551 VEGA | MGI Sequence Detail 2087 Not Applicable  
polypeptide OTTMUSP00000021022 VEGA | MGI Sequence Detail 365 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    73 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000015857 synapse-associated protein 1
  • InterPro Domains
    IPR005607 BSD domain
Molecular
Reagents
less
  • All nucleic 130
    cDNA 130

    Microarray probesets 4
Other
Accession IDs
less
MGI:2147985
References
more
  • Summaries
    All 33
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory