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Rbm25 Gene Detail
Summary
  • Symbol
    Rbm25
  • Name
    RNA binding motif protein 25
  • Synonyms
    2600011C06Rik, 2610015J01Rik, A130095G20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914289
    NCBI Gene: 67039
  • Gene Overview
    MyGene.info: RBM25
  • Alliance
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:83632230-83683127 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 38.81 cM, cytoband D3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    206 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914289
protein coding gene Chr12:83631236-83683127 (.)
129S1/SvImJ MGP_129S1SvImJ_G0019915
protein coding gene Chr12:84277968-84331501 (+)
A/J MGP_AJ_G0019872
protein coding gene Chr12:81081994-81138449 (+)
AKR/J MGP_AKRJ_G0019848
protein coding gene Chr12:83270933-83334903 (+)
BALB/cJ MGP_BALBcJ_G0019852
protein coding gene Chr12:81433411-81485772 (+)
C3H/HeJ MGP_C3HHeJ_G0019658
protein coding gene Chr12:83738683-83799112 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020304
protein coding gene Chr12:86695923-86748536 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017921
protein coding gene Chr12:78009311-78061156 (+)
CAST/EiJ MGP_CASTEiJ_G0019207
protein coding gene Chr12:78676301-78729418 (+)
CBA/J MGP_CBAJ_G0019629
protein coding gene Chr12:90021324-90086124 (+)
DBA/2J MGP_DBA2J_G0019744
protein coding gene Chr12:80629322-80683520 (+)
FVB/NJ MGP_FVBNJ_G0019730
protein coding gene Chr12:79572826-79631379 (+)
LP/J MGP_LPJ_G0019816
protein coding gene Chr12:84148532-84205392 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019769
protein coding gene Chr12:92993373-93061649 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020338
protein coding gene Chr12:82873615-82927173 (+)
PWK/PhJ MGP_PWKPhJ_G0018971
protein coding gene Chr12:75102761-75155471 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018766
protein coding gene Chr12:77336919-77478921 (+)
WSB/EiJ MGP_WSBEiJ_G0019259
protein coding gene Chr12:83539928-83600283 (+)



Homology
more
  • Human Ortholog
    RBM25, RNA binding motif protein 25
  • Human Ortholog
    RBM25, RNA binding motif protein 25
    Orthology source: HGNC
  • Synonyms
    fSAP94, NET52, RED120, RNPC7, S164, Snu71
  • Links
    NCBI Gene ID: 58517
    neXtProt AC: NX_P49756
    UniProt: P49756

  • Chr Location
    14q24.2; chr14:73058436-73121675 (+)  GRCh38.p7

  • HCOP
    human homology predictions: RBM25
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 67039 NCBI Gene Model | MGI Sequence Detail 50898 C57BL/6J ±  kb
transcript NM_001364415 RefSeq | MGI Sequence Detail 4340 C57BL/6  
polypeptide B2RY56 UniProt | EBI | MGI Sequence Detail 838 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 267
    cDNA 266
    Primer pair 1

    Microarray probesets 12
Other
Accession IDs
less
MGI:1917471, MGI:2144767, MGI:2144925, MGI:2144966, MGI:3034522
References
more
  • Summaries
    All 41
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 11
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory