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Rpl11
Gene Detail
Symbol

Name
ID
Rpl11
ribosomal protein L11
MGI:1914275
Synonyms
2010203J19Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 4
68.34 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:136028265-136053428 bp, - strand
From VEGA annotation of GRCm38

  25164 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:37376  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RPL11
Protein SuperFamily: ribosomal protein, L5p/L5a/L11e/organellar L5 types
Gene Tree: Rpl11

Human
homologs
RPL11, ribosomal protein L11
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 6135
neXtProt AC: NX_P62913

Human Synonyms: DBA7, GIG34, L11

Human Chr (Location): 1p36.1-p35; chr1:23691779-23696425 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human RPL11

Mutations,
alleles, and
phenotypes
All mutations/alleles(15) : Gene trapped(13) Targeted(2)
Genomic Mutations involving Rpl11 (1)
Interactions
Rpl11 interacts with 43 markers (Mir134, Mir194-1, Mir194-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (22 annotations)
Process protein localization to nucleus, protein targeting, ...
Component cytoplasm, cytosolic large ribosomal subunit, ...
Function poly(A) RNA binding, protein binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
cDNA source data(15)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rpl11 ; ZFIN rpl11    NEW 
Molecular
reagents
All nucleic(16) cDNA(16)
Microarray probesets(8)
Other database
links
VEGA Gene Model OTTMUSG00000009855 (Evidence)
Ensembl Gene Model ENSMUSG00000059291 (Evidence)
Entrez Gene 67025 (Evidence)
DFCI TC1603665, TC1573728
DoTS DT.101321319, DT.101410052, DT.94390800, DT.94382855, DT.110841612
Consensus CDS Project CCDS18799.1
International Mouse Phenotyping Consortium Status Rpl11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000009855 VEGA Gene Model | MGI Sequence Detail 25164 C57BL/6J ±  kb
transcript OTTMUST00000022846 VEGA | MGI Sequence Detail 833 Not Applicable 
polypeptide OTTMUSP00000010420 VEGA | MGI Sequence Detail 178 Not Applicable 

For the selected sequences
All sequences(56) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(301 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002132 Ribosomal protein L5
InterPro IPR020929 Ribosomal protein L5, conserved site
InterPro IPR022803 Ribosomal protein L5 domain
Protein Ontology PR:000014190 60S ribosomal protein L11
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:194321 Nott A, et al., S-nitrosylation of HDAC2 regulates the expression of the chromatin-remodeling factor Brm during radial neuron migration. Proc Natl Acad Sci U S A. 2013 Feb 19;110(8):3113-8
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory