Rpl11
Gene Detail

Symbol Name ID

Rpl11 ribosomal protein L11 MGI:1914275

Synonyms

2010203J19Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 4

68.34 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr4:136028265-136053428 bp, - strand From VEGA annotation of GRCm38   25164 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:37376  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: ribosomal protein, L5p/L5a/L11e/organellar L5 types
Gene Tree: Rpl11

Human homologs

Human Homolog		RPL11, ribosomal protein L11
NCBI Gene ID		6135
neXtProt AC		NX_P62913
Human Synonyms		DBA7, GIG34, L11
Human Chr (Location)		1p36.1-p35; chr1:24018269-24022915 (+)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human RPL11

Alleles and phenotypes

All alleles(14) : Targeted(1) Gene trapped(13)

Gene Ontology (GO) classifications

All GO classifications: (18 annotations)

Process	protein localization to nucleus, protein targeting, ...
Component	cytosolic large ribosomal subunit, intracellular, ...
Function	protein binding, RNA binding, ...

External Resources: FuncBase

Expression

Literature Summary: (2 records)
cDNA source data(15)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(16) cDNA(16)
Microarray probesets(8)

Other database links

VEGA Gene Model	OTTMUSG00000009855 (Evidence)
Ensembl Gene Model	ENSMUSG00000059291 (Evidence)
Entrez Gene	67025 (Evidence)
DFCI	TC1573728, TC1603665
DoTS	DT.101321319, DT.101410052, DT.110841612, DT.94382855, DT.94390800
Consensus CDS Project	CCDS18799.1
International Mouse Knockout Project Status	Rpl11

Sequences

Length	Strain/Species
genomic	OTTMUSG00000009855	VEGA Gene Model | MGI Sequence Detail	25164	C57BL/6J
transcript	OTTMUST00000022846	VEGA | MGI Sequence Detail	833	Not Applicable
polypeptide	OTTMUSP00000010420	VEGA | MGI Sequence Detail	178	Not Applicable

All sequences(54) RefSeq(2) UniProt(3)

Polymorphisms

SNPs(47 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR002132	Ribosomal protein L5
InterPro	IPR020929	Ribosomal protein L5, conserved site
InterPro	IPR022803	Ribosomal protein L5 domain
Protein Ontology	PR:000014190	60S ribosomal protein L11

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:194321 Nott A, et al., S-nitrosylation of HDAC2 regulates the expression of the chromatin-remodeling factor Brm during radial neuron migration. Proc Natl Acad Sci U S A. 2013 Feb 19;110(8):3113-8
All references(33)