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Rpl11 Gene Detail
Summary
  • Symbol
    Rpl11
  • Name
    ribosomal protein L11
  • Synonyms
    2010203J19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914275
    NCBI Gene: 67025
  • Gene Overview
    MyGene.info: RPL11
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:136049947-136053371 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 68.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    69 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914275
protein coding gene Chr4:136028265-136053428 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028959
protein coding gene Chr4:138530318-138562578 (-)
A/J MGP_AJ_G0028918
protein coding gene Chr4:132648589-132673317 (-)
AKR/J MGP_AKRJ_G0028870
protein coding gene Chr4:136484629-136511619 (-)
BALB/cJ MGP_BALBcJ_G0028942
protein coding gene Chr4:133319926-133346054 (-)
C3H/HeJ MGP_C3HHeJ_G0028656
protein coding gene Chr4:136760092-136790456 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029383
protein coding gene Chr4:143443280-143483464 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026654
protein coding gene Chr4:125696592-125722655 (-)
CAST/EiJ MGP_CASTEiJ_G0028088
protein coding gene Chr4:134898424-134928367 (-)
CBA/J MGP_CBAJ_G0028621
protein coding gene Chr4:147388504-147420447 (-)
DBA/2J MGP_DBA2J_G0028770
protein coding gene Chr4:133077961-133103905 (-)
FVB/NJ MGP_FVBNJ_G0028737
protein coding gene Chr4:132003968-132030431 (-)
LP/J MGP_LPJ_G0028869
protein coding gene Chr4:138626848-138658233 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028763
protein coding gene Chr4:151654091-151679862 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029421
protein coding gene Chr4:136934598-136967919 (-)
PWK/PhJ MGP_PWKPhJ_G0027808
protein coding gene Chr4:129845449-129871259 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027634
protein coding gene Chr4:132752657-132782498 (-)
WSB/EiJ MGP_WSBEiJ_G0028166
protein coding gene Chr4:137109636-137142751 (-)



Homology
more
  • Human Ortholog
    RPL11, ribosomal protein L11
  • Vertebrate Orthologs
    8
  • Human Ortholog
    RPL11, ribosomal protein L11
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DBA7, GIG34, L11, uL5
  • Links
    NCBI Gene ID: 6135
    neXtProt AC: NX_P62913
    UniProt: P62913

  • Chr Location
    1p36.11; chr1:23691779-23696425 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human RPL11 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 67025 NCBI Gene Model | MGI Sequence Detail 3425 C57BL/6J ±  kb
transcript NM_025919 RefSeq | MGI Sequence Detail 1231 C57BL/6  
polypeptide Q9CXW4 UniProt | EBI | MGI Sequence Detail 178 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR002132 Ribosomal protein L5
    IPR020929 Ribosomal protein L5, conserved site
    IPR031309 Ribosomal protein L5, C-terminal
    IPR022803 Ribosomal protein L5 domain superfamily
    IPR031310 Ribosomal protein L5, N-terminal
Molecular
Reagents
less
  • All nucleic 19
    cDNA 18
    Primer pair 1

    Microarray probesets 8
References
more
  • Summaries
    All 38
    Developmental Gene Expression 2
    Gene Ontology 12
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:248884 Kamio T, et al., Mice with a Mutation in the Mdm2 Gene That Interferes with MDM2/Ribosomal Protein Binding Develop a Defect in Erythropoiesis. PLoS One. 2016;11(4):e0152263

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory