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Rpl11
Gene Detail
 Symbol
Name
ID
Rpl11
ribosomal protein L11
MGI:1914275
Synonyms 2010203J19Rik
Feature Type protein coding gene
Genetic Map
Chromosome 4
68.34 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:136028265-136053428 bp, - strand
From VEGA annotation of GRCm38

  25164 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:37376  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: ribosomal protein, L5p/L5a/L11e/organellar L5 types
Gene Tree: Rpl11

Human
homologs
Human Homolog RPL11, ribosomal protein L11
NCBI Gene ID 6135
neXtProt AC  NX_P62913
Human Synonyms  DBA7, GIG34, L11
Human Chr (Location)  1p36.1-p35; chr1:23691779-23696425 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human RPL11
Mutations,
alleles, and
phenotypes
All mutations/alleles(14) : Gene trapped(13) Targeted(1)
Interactions
Rpl11 interacts with 43 markers (Mir134, Mir194-1, Mir194-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (21 annotations)
Process protein localization to nucleus, protein targeting, ...
Component cytosolic large ribosomal subunit, extracellular vesicular exosome, ...
Function poly(A) RNA binding, protein binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
cDNA source data(15)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(16) cDNA(16)
Microarray probesets(8)
Other database
links
VEGA Gene ModelOTTMUSG00000009855 (Evidence)
Ensembl Gene ModelENSMUSG00000059291 (Evidence)
Entrez Gene67025 (Evidence)
DFCITC1573728, TC1603665
DoTSDT.101321319, DT.101410052, DT.110841612, DT.94382855, DT.94390800
Consensus CDS ProjectCCDS18799.1
International Mouse Knockout Project StatusRpl11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000009855 VEGA Gene Model | MGI Sequence Detail 25164 C57BL/6J ±  kb
transcript OTTMUST00000022846 VEGA | MGI Sequence Detail 833 Not Applicable 
polypeptide OTTMUSP00000010420 VEGA | MGI Sequence Detail 178 Not Applicable 

For the selected sequences
All sequences(58) RefSeq(6) UniProt(3)
Polymorphisms SNPs within 2kb(301 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002132 Ribosomal protein L5
InterPro IPR020929 Ribosomal protein L5, conserved site
InterPro IPR022803 Ribosomal protein L5 domain
Protein Ontology PR:000014190 60S ribosomal protein L11
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:194321 Nott A, et al., S-nitrosylation of HDAC2 regulates the expression of the chromatin-remodeling factor Brm during radial neuron migration. Proc Natl Acad Sci U S A. 2013 Feb 19;110(8):3113-8
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory