About   Help   FAQ
Acad9
Gene Detail
Symbol

Name
ID
Acad9
acyl-Coenzyme A dehydrogenase family, member 9
MGI:1914272
Synonyms
2600017P15Rik, C630012L17Rik, NPD002
Feature Type
protein coding gene
Genetic Map
Chromosome 3
17.41 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:36065979-36094944 bp, + strand
From VEGA annotation of GRCm38

  28966 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8539  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Acad9

Human
homologs
Human Homolog ACAD9, acyl-CoA dehydrogenase family, member 9
NCBI Gene ID 28976
neXtProt AC  NX_Q9H845
Human Synonyms  NPD002
Human Chr (Location)  3q21.3; chr3:128879490-128913114 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human ACAD9
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(1) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Acad9 interacts with 343 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (97)    Tissues (97)    Images (11)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 96
RT-PCR 1
cDNA source data(121)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(123) cDNA(121) Primer pair(1) Other(1)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000023529 (Evidence)
Ensembl Gene ModelENSMUSG00000027710 (Evidence)
Entrez Gene229211 (Evidence)
UniGene260997
DFCITC1572608, TC1599032, TC1614459, TC1643737
DoTSDT.101127515, DT.94406985, DT.101167870, DT.492331, DT.101402314, DT.111045083, DT.97397667
EC1.3.99.-
Consensus CDS ProjectCCDS17310.1
International Mouse Knockout Project StatusAcad9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023529 VEGA Gene Model | MGI Sequence Detail 28966 C57BL/6J ±  kb
transcript OTTMUST00000057348 VEGA | MGI Sequence Detail 6021 Not Applicable 
polypeptide OTTMUSP00000027654 VEGA | MGI Sequence Detail 625 Not Applicable 

For the selected sequences
All sequences(81) RefSeq(4) UniProt(9)
Polymorphisms
SNPs within 2kb(213 from dbSNP Build 137)    SNPs within 2kb including multiple locations(215)
Protein-related
information
ResourceIDDescription
InterPro IPR006089 Acyl-CoA dehydrogenase, conserved site
InterPro IPR009100 Acyl-CoA dehydrogenase/oxidase
InterPro IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
InterPro IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
InterPro IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
Protein Ontology PR:000003599 acyl-CoA dehydrogenase family member 9, mitochondrial
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:2444674

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/16/2014
MGI 5.20
The Jackson Laboratory