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Acad9 Gene Detail
Summary
  • Symbol
    Acad9
  • Name
    acyl-Coenzyme A dehydrogenase family, member 9
  • Synonyms
    2600017P15Rik, C630012L17Rik, NPD002
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914272
    NCBI Gene: 229211
  • Gene Overview
    MyGene.info: ACAD9
Location & Maps
more
  • Sequence Map
    Chr3:36065979-36092853 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      26875 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 17.41 cM, cytoband B
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ACAD9, acyl-CoA dehydrogenase family member 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ACAD9, acyl-CoA dehydrogenase family member 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    NPD002
  • Links
    NCBI Gene ID: 28976
    neXtProt AC: NX_Q9H845

  • Chr Location
    3q21.3; chr3:128879490-128913114 (+)  GRCh38.p2
  • HomoloGene
    Vertebrate Homology Class 8539
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: ACAD9
  • Gene Tree
    Acad9
Human Diseases
more
  • Diseases
    1 with human ACAD9 associations

Human Disease Mouse Models
       Mitochondrial Complex I Deficiency Due to Acad9 Deficiency   OMIM: 611126
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    6
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    1 involving Acad9
  • Incidental Mutations
    Mutagenetix , APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    28
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    97
  • Tissues
    97
  • cDNA Data
    121
  • Literature Summary
    2
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023529 VEGA Gene Model | MGI Sequence Detail 26875 C57BL/6J ±  kb
transcript OTTMUST00000057348 VEGA | MGI Sequence Detail 3930 Not Applicable  
polypeptide OTTMUSP00000027654 VEGA | MGI Sequence Detail 625 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    195 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000003599 acyl-CoA dehydrogenase family member 9, mitochondrial
  • EC
    1.3.99.-
  • InterPro Domains
    IPR006089 Acyl-CoA dehydrogenase, conserved site
    IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
    IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
    IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain
    IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
Molecular
Reagents
less
  • All nucleic 123
    cDNA 121
    Primer pair 1
    Other 1

    Microarray probesets 7
Other
Accession IDs
less
MGI:2444674
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 7
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/27/2016
MGI 6.05 		The Jackson Laboratory