About   Help   FAQ
Actr6
Gene Detail
Symbol

Name
ID
Actr6
ARP6 actin-related protein 6
MGI:1914269
Synonyms
2010200J04Rik, Arp6, ArpX, CDA12
Feature Type
protein coding gene
Genetic Map
Chromosome 10
45.14 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:89711973-89732295 bp, - strand
From Ensembl annotation of GRCm38

  20323 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:6451  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Actr6

Human
homologs
Human Homolog ACTR6, ARP6 actin-related protein 6 homolog (yeast)
NCBI Gene ID 64431
neXtProt AC  NX_Q9GZN1
Human Synonyms  ARP6, hARP6, hARPX, HSPC281, MSTP136
Human Chr (Location)  12q23.1; chr12:100200087-100224424 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(6) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Actr6 interacts with 84 markers (Mir7-1, Mir17, Mir20b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process biological_process
Component cytoplasm, cytoskeleton, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (12)    Tissues (12)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 12
cDNA source data(26)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(26) cDNA(26)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000019948 (Evidence)
Entrez Gene67019 (Evidence)
UniGene335292
DFCITC1580890
DoTSDT.97362147, DT.482943
NIA Mouse Gene IndexU032120
Consensus CDS ProjectCCDS24118.1
International Mouse Knockout Project StatusActr6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000019948 Ensembl Gene Model | MGI Sequence Detail 20323 C57BL/6J ±  kb
transcript ENSMUST00000020109 Ensembl | MGI Sequence Detail 1703 Not Applicable 
polypeptide ENSMUSP00000020109 Ensembl | MGI Sequence Detail 396 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(8) UniProt(1)
Polymorphisms
SNPs within 2kb(247 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004000 Actin-related protein
Protein Ontology PR:000003699 actin-related protein 6
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)
Other
accession IDs
MGI:2143768

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/18/2014
MGI 5.20
The Jackson Laboratory