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Actr6
Gene Detail
Symbol

Name
ID
Actr6
ARP6 actin-related protein 6
MGI:1914269
Synonyms
2010200J04Rik, Arp6, ArpX, CDA12
Feature Type
protein coding gene
Genetic Map
Chromosome 10
45.14 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:89711973-89732295 bp, - strand
From Ensembl annotation of GRCm38

  20323 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:6451  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: ACTR6
Gene Tree: Actr6

Human
homologs
ACTR6, ARP6 actin-related protein 6 homolog (yeast)
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 64431
neXtProt AC: NX_Q9GZN1

Human Synonyms: ARP6, CDA12, hARP6, hARPX, HSPC281, MSTP136

Human Chr (Location): 12q23.1; chr12:100200087-100224424 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(6) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Actr6 interacts with 84 markers (Mir7-1, Mir17, Mir20b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process chromatin remodeling
Component cytoplasm, cytoskeleton, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (12)    Tissues (12)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 12
cDNA source data(26)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase actr6    NEW 
Molecular
reagents
All nucleic(26) cDNA(26)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000019948 (Evidence)
Entrez Gene 67019 (Evidence)
UniGene 335292
DFCI TC1580890
DoTS DT.97362147, DT.482943
NIA Mouse Gene Index U032120
Consensus CDS Project CCDS24118.1
International Mouse Phenotyping Consortium Status Actr6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000019948 Ensembl Gene Model | MGI Sequence Detail 20323 C57BL/6J ±  kb
transcript ENSMUST00000020109 Ensembl | MGI Sequence Detail 1703 Not Applicable 
polypeptide ENSMUSP00000020109 Ensembl | MGI Sequence Detail 396 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(10) UniProt(1)
Polymorphisms
SNPs within 2kb(247 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004000 Actin-related protein
Protein Ontology PR:000003699 actin-related protein 6
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:2143768

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory