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Tm9sf3 Gene Detail
Summary
  • Symbol
    Tm9sf3
  • Name
    transmembrane 9 superfamily member 3
  • Synonyms
    1810073M23Rik, 2810031D16Rik, Smbp
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914262
    NCBI Gene: 107358
  • Alliance
    genome feature page
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:41199283-41252436 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 34.54 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1383 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914262
 protein coding gene Chr19:41199281-41252443 (-)
129S1/SvImJ ENSMUSG00200025746
 protein coding gene Chr19:37940641-37993806 (-)
A/J ENSMUSG00195011409
 protein coding gene Chr19:38040320-38093478 (-)
AKR/J ENSMUSG00220018519
 protein coding gene Chr19:37857400-37910561 (-)
BALB/cJ ENSMUSG00180032187
 protein coding gene Chr19:38292718-38345876 (-)
C3H/HeJ ENSMUSG00175041213
 protein coding gene Chr19:37819687-37872849 (-)
C57BL/6NJ ENSMUSG00215026513
 protein coding gene Chr19:37888656-37941813 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022949
 protein coding gene Chr19:37890866-37945944 (-)
CAST/EiJ ENSTCUG00005014751
 protein coding gene Chr19:37496333-37549392 (-)
CBA/J ENSMUSG00210029376
 protein coding gene Chr19:37901814-37954974 (-)
DBA/2J ENSMUSG00185030432
 protein coding gene Chr19:38421978-38475142 (-)
FVB/NJ ENSMUSG00205006342
 protein coding gene Chr19:37366292-37419443 (-)
JF1/MsJ ENSUMUG00000042083
 protein coding gene Chr19:38588344-38641218 (-)
LP/J ENSMUSG00230032115
 protein coding gene Chr19:39210817-39263979 (-)
NOD/ShiLtJ ENSMUSG00190010424
 protein coding gene Chr19:37771771-37824936 (-)
NZO/HlLtJ ENSMUSG00225041788
 protein coding gene Chr19:42762049-42815206 (-)
PWK/PhJ ENSLUMG00010000960
 protein coding gene Chr19:37756967-37809861 (-)
SPRET/EiJ ENSMSPG00010018606
 protein coding gene Chr19:37490899-37539958 (-)
WSB/EiJ ENSIUOG00005032783
 protein coding gene Chr19:37282375-37335547 (-)



Homology
more
  • Human Ortholog
    TM9SF3, transmembrane 9 superfamily member 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TM9SF3, transmembrane 9 superfamily member 3
  • Synonyms
    EP70-P-iso, SMBP
  • Links
    NCBI Gene ID: 56889
    UniProt: Q9HD45

  • Chr Location
    10q24.1; chr10:96518110-96587452 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    632
  • Tissues
    19
  • cDNA Data
    299
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000025016 Ensembl Gene Model | MGI Sequence Detail 53154 C57BL/6J ±  kb
    transcript ENSMUST00000237871 Ensembl | MGI Sequence Detail 3170 Not Applicable  
    polypeptide ENSMUSP00000158318 Ensembl | MGI Sequence Detail 587 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 299
      cDNA 299
      Antibodies 2

      Microarray probesets 7
    Other
    Accession IDs
    less
    MGI:1914471, MGI:2147477, MGI:2147517, MGI:2147714, MGI:2147744
    References
    more
    • Summaries
      All 36
      Developmental Gene Expression 2
      Gene Ontology 3
      Phenotypes 9
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:348683 Zhao R, et al., Comparative analysis of the expression patterns of TM9SF family members in mice. Gene Expr Patterns. 2024 May 6;52:119366
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory