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Psmd12 Gene Detail
Summary
  • Symbol
    Psmd12
  • Name
    proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
  • Synonyms
    1500002F15Rik, P55
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914247
    NCBI Gene: 66997
  • Gene Overview
    MyGene.info: PSMD12
Location & Maps
more
  • Sequence Map
    Chr11:107479484-107504362 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      24879 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 70.29 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    PSMD12, proteasome 26S subunit, non-ATPase 12
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PSMD12, proteasome 26S subunit, non-ATPase 12
    Orthology source: HomoloGene, HGNC
  • Synonyms
    p55, Rpn5
  • Links
    NCBI Gene ID: 5718
    neXtProt AC: NX_O00232

  • Chr Location
    17q24.2; chr17:67340486-67366605 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    40
  • Gene trapped
    38
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000003659 VEGA Gene Model | MGI Sequence Detail 24879 C57BL/6J ±  kb
transcript OTTMUST00000007901 VEGA | MGI Sequence Detail 1904 Not Applicable  
polypeptide OTTMUSP00000003832 VEGA | MGI Sequence Detail 456 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    73 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000002178 26S proteasome non-ATPase regulatory subunit 12
  • InterPro Domains
    IPR000717 Proteasome component (PCI) domain
    IPR011991 Winged helix-turn-helix DNA-binding domain
Molecular
Reagents
less
  • All nucleic 144
    cDNA 144

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144193
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
  • Latest
    J:198500 Nakahara M, et al., Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from MSM/Ms mice. Mamm Genome. 2013 Jun;24(5-6):228-39

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory