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Zcchc18 Gene Detail
Summary
  • Symbol
    Zcchc18
  • Name
    zinc finger, CCHC domain containing 18
  • Synonyms
    1500031H04Rik, Sizn2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914245
    NCBI Gene: 66995
Location & Maps
more
  • Sequence Map
    ChrX:136993155-136998472 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      5318 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 59.10 cM, cytoband F1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    ZCCHC18, zinc finger CCHC-type containing 18
  • Vertebrate Orthologs
    6
  • Human Ortholog
    ZCCHC18, zinc finger CCHC-type containing 18
    Orthology source: HGNC, HomoloGene
  • Synonyms
    PNMA7B, SIZN2
  • Links
    NCBI Gene ID: 644353
    neXtProt AC: NX_P0CG32

  • Chr Location
    Xq22.2; chrX:104112416-104115847 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
  • All Mutations and Alleles
    1
  • Targeted
    1
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018826 VEGA Gene Model | MGI Sequence Detail 5318 C57BL/6J ±  kb
transcript OTTMUST00000045305 VEGA | MGI Sequence Detail 2045 Not Applicable  
polypeptide OTTMUSP00000020377 VEGA | MGI Sequence Detail 393 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    52 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000034612 zinc finger CCHC domain-containing protein 18
  • InterPro Domains
    IPR026523 Paraneoplastic antigen Ma
Molecular
Reagents
less
  • All nucleic 56
    cDNA 55
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 25
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory