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Trappc13 Gene Detail
Summary
  • Symbol
    Trappc13
  • Name
    trafficking protein particle complex 13
  • Synonyms
    2410002O22Rik, 2610524F24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914225
    NCBI Gene: 66975
Location & Maps
more
  • Sequence Map
    Chr13:104142149-104178469 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      36321 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 56.28 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TRAPPC13, trafficking protein particle complex 13
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TRAPPC13, trafficking protein particle complex 13
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C5orf44
  • Links
    NCBI Gene ID: 80006
    neXtProt AC: NX_A5PLN9

  • Chr Location
    5q12.3; chr5:65624717-65666127 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    49
  • Gene trapped
    47
  • Targeted
    2
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000032909 VEGA Gene Model | MGI Sequence Detail 36321 C57BL/6J ±  kb
transcript OTTMUST00000082020 VEGA | MGI Sequence Detail 2342 Not Applicable  
polypeptide OTTMUSP00000043937 VEGA | MGI Sequence Detail 418 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    568 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR010378 Protein of unknown function DUF974
Molecular
Reagents
less
  • All nucleic 91
    cDNA 91

    Microarray probesets 8
Other
Accession IDs
less
MGI:1917155, MGI:2145247, MGI:2145341
References
more
  • Summaries
    All 27
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory