Trit1
Gene Detail

Symbol Name ID

Trit1 tRNA isopentenyltransferase 1 MGI:1914216

Synonyms

2310075G14Rik, MOD5

Feature Type

protein coding gene

Genetic Map

Chromosome 4

57.36 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr4:123016597-123054949 bp, + strand From VEGA annotation of GRCm38   38353 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:7010  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Trit1

Human homologs

Human Homolog		TRIT1, tRNA isopentenyltransferase 1
NCBI Gene ID		54802
neXtProt AC		NX_Q9H3H1
Human Synonyms		IPT, MOD5
Human Chr (Location)		1p34.2; chr1:40306703-40349177 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(34) : Targeted(3) Gene trapped(31)

Gene Ontology (GO) classifications

All GO classifications: (11 annotations)

Process	tRNA processing
Component	cytoplasm, mitochondrion, ...
Function	ATP binding, metal ion binding, ...

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Images (16)
Theiler Stages: 22

Assay Type	Results
RNA in situ	94

cDNA source data(43)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(43) cDNA(43)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000008938 (Evidence)
Ensembl Gene Model	ENSMUSG00000028653 (Evidence)
Entrez Gene	66966 (Evidence)
UniGene	235030
DFCI	TC1579005, TC1592089
DoTS	DT.101374215, DT.110821289, DT.99847319
NIA Mouse Gene Index	U004764
EC	2.5.1.75
Consensus CDS Project	CCDS18607.1
International Mouse Knockout Project Status	Trit1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000008938	VEGA Gene Model | MGI Sequence Detail	38353	C57BL/6J
transcript	OTTMUST00000020304	VEGA | MGI Sequence Detail	2074	Not Applicable
polypeptide	OTTMUSP00000009314	VEGA | MGI Sequence Detail	467	Not Applicable

All sequences(36) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(100 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR018022	tRNA delta(2)-isopentenylpyrophosphate transferase
InterPro	IPR002627	tRNA isopentenyltransferase
InterPro	IPR022755	Zinc finger, double-stranded RNA binding
Protein Ontology	PR:000016675	tRNA dimethylallyltransferase, mitochondrial

References

(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:151002 Pagliarini DJ, et al., A mitochondrial protein compendium elucidates complex I disease biology. Cell. 2008 Jul 11;134(1):112-23
All references(37)

Other accession IDs

MGI:2140221, MGI:2140222, MGI:2140528