Sh3d21
Gene Detail

Symbol Name ID

Sh3d21 SH3 domain containing 21 MGI:1914188

Synonyms

1700029G01Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 4

59.97 cM, cytoband D2.1
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr4:126150602-126163491 bp, - strand From VEGA annotation of GRCm38   12890 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:12057  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: Sh3d21

Human homologs

Human Homolog		SH3D21, SH3 domain containing 21
NCBI Gene ID		79729
neXtProt AC		NX_A4FU49
Human Synonyms		C1orf113
Human Chr (Location)		1p34.3; chr1:36771994-36786948 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(3) : Gene trapped(3)

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

cDNA source data(9)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(9) cDNA(9)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000009352 (Evidence)
Ensembl Gene Model	ENSMUSG00000073758 (Evidence)
Entrez Gene	66938 (Evidence)
DFCI	TC1581013, TC1601564, TC1609637, TC1615123
DoTS	DT.101268885, DT.101716587, DT.110809913, DT.490493, DT.94180012, DT.97410030
NIA Mouse Gene Index	U025515
Consensus CDS Project	CCDS18644.1, CCDS51301.1
International Mouse Knockout Project Status	Sh3d21

Sequences

Length	Strain/Species
genomic	OTTMUSG00000009352	VEGA Gene Model | MGI Sequence Detail	12890	C57BL/6J
transcript	OTTMUST00000021309	VEGA | MGI Sequence Detail	2384	Not Applicable
polypeptide	OTTMUSP00000009744	VEGA | MGI Sequence Detail	665	Not Applicable

All sequences(46) RefSeq(4) UniProt(3)

Polymorphisms

SNPs(32 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001452	Src homology-3 domain
InterPro	IPR011511	Variant SH3

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
All references(27)

Other accession IDs

MGI:2140452