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Pccb
Gene Detail
Symbol

Name
ID
Pccb
propionyl Coenzyme A carboxylase, beta polypeptide
MGI:1914154
Synonyms
1300012P06Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 9
53.09 cM
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr9:100982032-101034898 bp, - strand
From VEGA annotation of GRCm38

  52867 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:447  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Pccb

Human
homologs
Human Homolog PCCB, propionyl CoA carboxylase, beta polypeptide
NCBI Gene ID 5096
neXtProt AC  NX_P05166
Human Chr (Location)  3q21-q22; chr3:136250325-136332589 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human PCCB
Mutations,
alleles, and
phenotypes
All mutations/alleles(19) : Gene trapped(18) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pccb interacts with 73 markers (Mir19a, Mir28b, Mir28c, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Component mitochondrion
Function ATP binding, ligase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(13)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(13) Primer pair(2)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000033484 (Evidence)
Ensembl Gene ModelENSMUSG00000032527 (Evidence)
Entrez Gene66904 (Evidence)
DFCITC1574332
DoTSDT.55234580, DT.110634831
NIA Mouse Gene IndexU031244
EC6.4.1.3
Consensus CDS ProjectCCDS23442.1
International Mouse Knockout Project StatusPccb
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033484 VEGA Gene Model | MGI Sequence Detail 52867 C57BL/6J ±  kb
transcript OTTMUST00000084172 VEGA | MGI Sequence Detail 2320 Not Applicable 
polypeptide OTTMUSP00000045332 VEGA | MGI Sequence Detail 541 Not Applicable 

For the selected sequences
All sequences(61) RefSeq(6) UniProt(16)
Polymorphisms
PCR(1) : SNPs within 2kb(940 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit
InterPro IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal
InterPro IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal
InterPro IPR000022 Carboxyl transferase
Protein Ontology PR:000012340 propionyl-CoA carboxylase beta chain, mitochondrial
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(35)
Other
accession IDs
MGI:2143011, MGI:2143446

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory