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Fip1l1 Gene Detail
Summary
  • Symbol
    Fip1l1
  • Name
    FIP1 like 1 (S. cerevisiae)
  • Synonyms
    1300019H17Rik, Rje
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914149
    NCBI Gene: 66899
  • Gene Overview
    MyGene.info: FIP1L1
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:74535449-74598800 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 39.51 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    322 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914149
protein coding gene Chr5:74535353-74598800 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029633
protein coding gene Chr5:74624008-74690380 (+)
A/J MGP_AJ_G0029601
protein coding gene Chr5:71791893-71855051 (+)
AKR/J MGP_AKRJ_G0029549
protein coding gene Chr5:74141104-74207060 (+)
BALB/cJ MGP_BALBcJ_G0029610
protein coding gene Chr5:72504106-72568088 (+)
C3H/HeJ MGP_C3HHeJ_G0029333
protein coding gene Chr5:74521197-74588547 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030064
protein coding gene Chr5:77645203-77715469 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027304
protein coding gene Chr5:67457240-67520651 (+)
CAST/EiJ MGP_CASTEiJ_G0028741
protein coding gene Chr5:73614461-73684708 (+)
CBA/J MGP_CBAJ_G0029302
protein coding gene Chr5:80221435-80286799 (+)
DBA/2J MGP_DBA2J_G0029447
protein coding gene Chr5:71871392-71940661 (+)
FVB/NJ MGP_FVBNJ_G0029408
protein coding gene Chr5:71024820-71088283 (+)
LP/J MGP_LPJ_G0029533
protein coding gene Chr5:75058679-75123704 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029435
protein coding gene Chr5:83447251-83513883 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030097
protein coding gene Chr5:73662750-73732308 (+)
PWK/PhJ MGP_PWKPhJ_G0028464
protein coding gene Chr5:70841499-70908567 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028299
protein coding gene Chr5:73020477-73084594 (+)
WSB/EiJ MGP_WSBEiJ_G0028821
protein coding gene Chr5:73955343-74019744 (+)



Homology
more
  • Human Ortholog
    FIP1L1, factor interacting with PAPOLA and CPSF1
  • Vertebrate Orthologs
    4
  • Human Ortholog
    FIP1L1, factor interacting with PAPOLA and CPSF1
    Orthology source: HGNC
  • Synonyms
    FIP1, hFip1, Rhe
  • Links
    NCBI Gene ID: 81608
    neXtProt AC: NX_Q6UN15
    UniProt: Q6UN15

  • Chr Location
    4q12; chr4:53377572-53462611 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    259 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029227 Ensembl Gene Model | MGI Sequence Detail 63352 C57BL/6J ±  kb
transcript ENSMUST00000113536 Ensembl | MGI Sequence Detail 4769 Not Applicable  
polypeptide ENSMUSP00000109164 Ensembl | MGI Sequence Detail 581 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 283
    Diseases 1
    Gene Ontology 4
    Phenotypes 259
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:266037 Jain S, et al., Melanotan II causes hypothermia in mice by activation of mast cells and stimulation of histamine 1 receptors. Am J Physiol Endocrinol Metab. 2018 Sep 1;315(3):E357-E366

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory