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Acadsb
Gene Detail
Symbol

Name
ID
Acadsb
acyl-Coenzyme A dehydrogenase, short/branched chain
MGI:1914135
Synonyms
1300003O09Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 7
74.03 cM, cytoband F4
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr7:131410601-131446211 bp, + strand
From VEGA annotation of GRCm38

  35611 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:1216  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

HCOP human homology predictions: ACADSB
Gene Tree: Acadsb

Human
homologs
ACADSB, acyl-CoA dehydrogenase, short/branched chain
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 36
neXtProt AC: NX_P45954

Human Synonyms: 2-MEBCAD, ACAD7, SBCAD

Human Chr (Location): 10q26.13; chr10:123008913-123058290 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human ACADSB

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Acadsb interacts with 283 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (4 records)
Data Summary: Results (131)    Tissues (104)    Images (40)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 123
RT-PCR 8
cDNA source data(14)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase acadsb    NEW 
Molecular
reagents
All nucleic(16) cDNA(14) Primer pair(2)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000026268 (Evidence)
Ensembl Gene Model ENSMUSG00000030861 (Evidence)
Entrez Gene 66885 (Evidence)
DFCI TC1572905, TC1605828, TC1614208
DoTS DT.101201360, DT.101403952, DT.529590, DT.94276181, DT.97368316, DT.97408432
NIA Mouse Gene Index U008855
EC 1.3.8.5
Consensus CDS Project CCDS21916.1
International Mouse Phenotyping Consortium Status Acadsb
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026268 VEGA Gene Model | MGI Sequence Detail 35611 C57BL/6J ±  kb
transcript OTTMUST00000064983 VEGA | MGI Sequence Detail 2466 Not Applicable 
polypeptide OTTMUSP00000032329 VEGA | MGI Sequence Detail 465 Not Applicable 

For the selected sequences
All sequences(53) RefSeq(2) UniProt(5)
Polymorphisms
SNPs within 2kb(71 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006089 Acyl-CoA dehydrogenase, conserved site
InterPro IPR009100 Acyl-CoA dehydrogenase/oxidase
InterPro IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
InterPro IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
InterPro IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
Protein Ontology PR:000003603 short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(33)
Other
accession IDs
MGI:2142281

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory