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Plbd1 Gene Detail
Summary
  • Symbol
    Plbd1
  • Name
    phospholipase B domain containing 1
  • Synonyms
    1100001H23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914107
    NCBI Gene: 66857
  • Alliance
  • Transcription Start Sites
    16 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:136612070-136661928 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 66.59 cM, cytoband G1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    792 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914107
protein coding gene Chr6:136612070-136662271 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031423
protein coding gene Chr6:141044173-141100920 (-)
A/J MGP_AJ_G0031399
protein coding gene Chr6:135461862-135510549 (-)
AKR/J MGP_AKRJ_G0031326
protein coding gene Chr6:139581695-139636689 (-)
BALB/cJ MGP_BALBcJ_G0031406
protein coding gene Chr6:135331580-135388048 (-)
C3H/HeJ MGP_C3HHeJ_G0031127
protein coding gene Chr6:139624039-139673801 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031866
protein coding gene Chr6:144919140-144972306 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028997
protein coding gene Chr6:134622411-134675800 (-)
CAST/EiJ MGP_CASTEiJ_G0030496
protein coding gene Chr6:139115617-139163779 (-)
CBA/J MGP_CBAJ_G0031086
protein coding gene Chr6:150286094-150344346 (-)
DBA/2J MGP_DBA2J_G0031244
protein coding gene Chr6:134325118-134373590 (-)
FVB/NJ MGP_FVBNJ_G0031194
protein coding gene Chr6:133234976-133284796 (-)
LP/J MGP_LPJ_G0031328
protein coding gene Chr6:141172988-141225578 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031234
protein coding gene Chr6:154188391-154250579 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031898
protein coding gene Chr6:139353050-139402553 (-)
PWK/PhJ MGP_PWKPhJ_G0030222
protein coding gene Chr6:132840193-132890041 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030045
protein coding gene Chr6:137599987-137650059 (-)
WSB/EiJ MGP_WSBEiJ_G0030587
protein coding gene Chr6:139974231-140023951 (-)



Homology
more
  • Human Ortholog
    PLBD1, phospholipase B domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PLBD1, phospholipase B domain containing 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 79887
    neXtProt AC: NX_Q6P4A8
    UniProt: Q6P4A8

  • Chr Location
    12p13.1; chr12:14503663-14567857 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
No abnormal phenotype was observed in a high-throughput screen, nor in a pathology assessment.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030214 Ensembl Gene Model | MGI Sequence Detail 49859 C57BL/6J ±  kb
transcript ENSMUST00000032336 Ensembl | MGI Sequence Detail 2010 Not Applicable  
polypeptide ENSMUSP00000032336 Ensembl | MGI Sequence Detail 550 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 35
    cDNA 35

    Microarray probesets 3
References
more
  • Summaries
    All 29
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:213427 Adissu HA, et al., Histopathology reveals correlative and unique phenotypes in a high-throughput mouse phenotyping screen. Dis Model Mech. 2014 May;7(5):515-24

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory