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Smim7 Gene Detail
Summary
  • Symbol
    Smim7
  • Name
    small integral membrane protein 7
  • Synonyms
    9130011J15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914068
    NCBI Gene: 66818
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:72565198-72571048 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 35.08 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    65 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914068
protein coding gene Chr8:72565188-72571088 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033786
protein coding gene Chr8:73078616-73084300 (-)
A/J MGP_AJ_G0033768
protein coding gene Chr8:70101440-70107311 (-)
AKR/J MGP_AKRJ_G0033695
protein coding gene Chr8:72195139-72200862 (-)
BALB/cJ MGP_BALBcJ_G0033762
protein coding gene Chr8:70244489-70250179 (-)
C3H/HeJ MGP_C3HHeJ_G0033471
protein coding gene Chr8:72816347-72822037 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034282
protein coding gene Chr8:75840991-75846852 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031223
protein coding gene Chr8:64622882-64628647 (-)
CAST/EiJ MGP_CASTEiJ_G0032800
protein coding gene Chr8:72161132-72173252 (-)
CBA/J MGP_CBAJ_G0033450
protein coding gene Chr8:78553248-78558938 (-)
DBA/2J MGP_DBA2J_G0033604
protein coding gene Chr8:69852718-69858408 (-)
FVB/NJ MGP_FVBNJ_G0033549
protein coding gene Chr8:68931519-68937204 (-)
LP/J MGP_LPJ_G0033693
protein coding gene Chr8:73152993-73158716 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033593
protein coding gene Chr8:81029356-81035183 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034299
protein coding gene Chr8:72275581-72281271 (-)
PWK/PhJ MGP_PWKPhJ_G0032506
protein coding gene Chr8:69116264-69122411 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032344
protein coding gene Chr8:71185624-71191331 (-)
WSB/EiJ MGP_WSBEiJ_G0032915
protein coding gene Chr8:72559190-72564880 (-)



Homology
more
  • Human Ortholog
    SMIM7, small integral membrane protein 7
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SMIM7, small integral membrane protein 7
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C19orf42
  • Links
    NCBI Gene ID: 79086
    neXtProt AC: NX_Q9BQ49
    UniProt: Q9BQ49

  • Chr Location
    19p13.11; chr19:16630741-16660177 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    4
  • Targeted
    1
  • Genomic Mutations
    1 involving Smim7
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66818 NCBI Gene Model | MGI Sequence Detail 5851 C57BL/6J ±  kb
transcript NM_172396 RefSeq | MGI Sequence Detail 2842 C57BL/6  
polypeptide Q5RKS2 UniProt | EBI | MGI Sequence Detail 75 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR037659 Small integral membrane protein 7
Molecular
Reagents
less
  • All nucleic 169
    cDNA 169

    Microarray probesets 6
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory