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Ppcdc Gene Detail
Summary
  • Symbol
    Ppcdc
  • Name
    phosphopantothenoylcysteine decarboxylase
  • Synonyms
    1810057I13Rik, 8430432M10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914062
    NCBI Gene: 66812
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:57385095-57440124 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 31.04 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    280 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914062
protein coding gene Chr9:57385095-57440175 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034864
protein coding gene Chr9:56618942-56643819 (-)
A/J MGP_AJ_G0034845
protein coding gene Chr9:54794028-54821358 (-)
AKR/J MGP_AKRJ_G0034774
protein coding gene Chr9:56056757-56081263 (-)
BALB/cJ MGP_BALBcJ_G0034837
protein coding gene Chr9:54571769-54600337 (-)
C3H/HeJ MGP_C3HHeJ_G0034547
protein coding gene Chr9:56535326-56562715 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035356
protein coding gene Chr9:58205183-58234159 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032267
protein coding gene Chr9:54110874-54134519 (-)
CAST/EiJ MGP_CASTEiJ_G0033868
protein coding gene Chr9:56617031-56646618 (-)
CBA/J MGP_CBAJ_G0034518
protein coding gene Chr9:60232869-60262738 (-)
DBA/2J MGP_DBA2J_G0034677
protein coding gene Chr9:54662150-54689840 (-)
FVB/NJ MGP_FVBNJ_G0034619
protein coding gene Chr9:53884932-53912547 (-)
LP/J MGP_LPJ_G0034760
protein coding gene Chr9:56916780-56944804 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034662
protein coding gene Chr9:61731137-61761087 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035378
protein coding gene Chr9:56075450-56103156 (-)
PWK/PhJ MGP_PWKPhJ_G0033573
protein coding gene Chr9:54697355-54724465 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033407
protein coding gene Chr9:56362870-56393712 (-)
WSB/EiJ MGP_WSBEiJ_G0033981
protein coding gene Chr9:56007608-56033803 (-)



Homology
more
  • Human Ortholog
    PPCDC, phosphopantothenoylcysteine decarboxylase
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PPCDC, phosphopantothenoylcysteine decarboxylase
    Orthology source: HomoloGene, HGNC
  • Synonyms
    coaC, MDS018, PPC-DC
  • Links
    NCBI Gene ID: 60490
    neXtProt AC: NX_Q96CD2
    UniProt: Q96CD2

  • Chr Location
    15q24.2; chr15:75023533-75060180 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11049
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: PPCDC
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063849 Ensembl Gene Model | MGI Sequence Detail 55030 C57BL/6J ±  kb
transcript ENSMUST00000085709 Ensembl | MGI Sequence Detail 2744 Not Applicable  
polypeptide ENSMUSP00000082856 Ensembl | MGI Sequence Detail 204 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 64
    cDNA 64

    Microarray probesets 5
Other
Accession IDs
less
MGI:1919287
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory