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Atg10 Gene Detail
Summary
  • Symbol
    Atg10
  • Name
    autophagy related 10
  • Synonyms
    5330424L23Rik, 5430428K15Rik, APG10, Apg10l, Apg10p
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914045
    NCBI Gene: 66795
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:91083475-91372087 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 13, 46.46 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1647 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914045
protein coding gene Chr13:91083467-91372189 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020806
protein coding gene Chr13:92161413-92477572 (-)
A/J MGP_AJ_G0020760
protein coding gene Chr13:88763658-89058212 (-)
AKR/J MGP_AKRJ_G0020733
protein coding gene Chr13:91477017-91766359 (-)
BALB/cJ MGP_BALBcJ_G0020756
protein coding gene Chr13:89422684-89709598 (-)
C3H/HeJ MGP_C3HHeJ_G0020550
protein coding gene Chr13:91159241-91453333 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021193
protein coding gene Chr13:95028999-95345831 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018761
protein coding gene Chr13:84769450-85054404 (-)
CAST/EiJ MGP_CASTEiJ_G0020068
protein coding gene Chr13:90387354-90699928 (-)
CBA/J MGP_CBAJ_G0020509
protein coding gene Chr13:98788979-99101763 (-)
DBA/2J MGP_DBA2J_G0020634
protein coding gene Chr13:88550380-88834249 (-)
FVB/NJ MGP_FVBNJ_G0020614
protein coding gene Chr13:87369765-87656140 (-)
LP/J MGP_LPJ_G0020707
protein coding gene Chr13:92314667-92610120 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020643
protein coding gene Chr13:99261286-99600913 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021233
protein coding gene Chr13:90878145-91178164 (-)
PWK/PhJ MGP_PWKPhJ_G0019821
protein coding gene Chr13:87280453-87576613 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019644
protein coding gene Chr13:87145164-87446193 (-)
WSB/EiJ MGP_WSBEiJ_G0020126
protein coding gene Chr13:91350234-91652305 (-)



Homology
more
  • Human Ortholog
    ATG10, autophagy related 10
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ATG10, autophagy related 10
  • Synonyms
    APG10, APG10L, pp12616
  • Links
    NCBI Gene ID: 83734
    neXtProt AC: NX_Q9H0Y0
    UniProt: Q9H0Y0

  • Chr Location
    5q14.1-q14.2; chr5:81972023-82276857 (+)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021619 Ensembl Gene Model | MGI Sequence Detail 288613 C57BL/6J ±  kb
transcript ENSMUST00000022119 Ensembl | MGI Sequence Detail 1583 Not Applicable  
polypeptide ENSMUSP00000022119 Ensembl | MGI Sequence Detail 211 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 3
Other
Accession IDs
less
MGI:1924390, MGI:2145306
References
more
  • Summaries
    All 38
    Developmental Gene Expression 2
    Gene Ontology 7
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:329967 Li H, et al., Destabilization of TP53 by USP10 is essential for neonatal autophagy and survival. Cell Rep. 2022 Oct 4;41(1):111435

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory