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Aknaos Gene Detail
Summary
  • Symbol
    Aknaos
  • Name
    AT-hook transcription factor, opposite strand
  • Synonyms
    4933437N03Rik
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:1914033
    NCBI Gene: 66783
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:63381358-63394018 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 33.96 cM, cytoband C1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    125 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914033
antisense lncRNA gene Chr4:63377106-63394019 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003908
antisense lncRNA gene Chr4:62386786-62400015 (+)
A/J MGP_AJ_G0003888
antisense lncRNA gene Chr4:60145510-60158164 (+)
AKR/J MGP_AKRJ_G0003865
antisense lncRNA gene Chr4:61784889-61798148 (+)
BALB/cJ MGP_BALBcJ_G0003874
antisense lncRNA gene Chr4:60333894-60346587 (+)
C3H/HeJ MGP_C3HHeJ_G0003821
antisense lncRNA gene Chr4:62310031-62323254 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004022
antisense lncRNA gene Chr4:64526557-64539234 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003513
antisense lncRNA gene Chr4:57497054-57510282 (+)
CAST/EiJ MGP_CASTEiJ_G0003785
antisense lncRNA gene Chr4:60288723-60301775 (+)
CBA/J MGP_CBAJ_G0003814
antisense lncRNA gene Chr4:66789116-66804037 (+)
DBA/2J MGP_DBA2J_G0003831
antisense lncRNA gene Chr4:59998322-60011455 (+)
FVB/NJ MGP_FVBNJ_G0003849
antisense lncRNA gene Chr4:59274574-59289113 (+)
LP/J MGP_LPJ_G0003910
antisense lncRNA gene Chr4:62671027-62686184 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003837
antisense lncRNA gene Chr4:69897884-69912527 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004017
antisense lncRNA gene Chr4:61892119-61906125 (+)
PWK/PhJ MGP_PWKPhJ_G0003740
antisense lncRNA gene Chr4:58531843-58544727 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003686
antisense lncRNA gene Chr4:59351974-59364837 (+)
WSB/EiJ MGP_WSBEiJ_G0003820
antisense lncRNA gene Chr4:61922093-61936770 (+)



Homology
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Gene Ontology
(GO)
Classifications
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086953 Ensembl Gene Model | MGI Sequence Detail 12661 C57BL/6J ±  kb
transcript ENSMUST00000144095 Ensembl | MGI Sequence Detail 1104 Not Applicable  
polypeptide Q9D3S2 UniProt | EBI | MGI Sequence Detail 136 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 14
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/13/2020
MGI 6.16
The Jackson Laboratory