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4933434E20Rik Gene Detail
Summary
  • Symbol
    4933434E20Rik
  • Name
    RIKEN cDNA 4933434E20 gene
  • Synonyms
    5730552F22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914027
    NCBI Gene: 99650
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:90051636-90063341 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 39.20 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    21 from dbSNP Build 142
  • Strain Annotations
    10
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914027
protein coding gene Chr3:90051636-90068347 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0027416
protein coding gene Chr3:87320571-87339541 (+)
AKR/J MGP_AKRJ_G0027380
protein coding gene Chr3:89455598-89476814 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0027167
protein coding gene Chr3:89634529-89650932 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027871
protein coding gene Chr3:93705256-93722261 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025223
protein coding gene Chr3:82819234-82834687 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0027141
protein coding gene Chr3:96951231-96968473 (+)
DBA/2J MGP_DBA2J_G0027279
protein coding gene Chr3:86694327-86713000 (+)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0027267
protein coding gene Chr3:103129920-103148450 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027930
protein coding gene Chr3:89201625-89226540 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    C1orf43, chromosome 1 open reading frame 43
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C1orf43, chromosome 1 open reading frame 43
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HSPC012, NICE3, NICE-3, NS5ATP4, S863-3
  • Links
    NCBI Gene ID: 25912
    neXtProt AC: NX_Q9BWL3
    UniProt: Q9BWL3

  • Chr Location
    1q21.3; chr1:154206701-154220797 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    65 phenotypes from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    27
  • Chemically induced (other)
    1
  • Gene trapped
    22
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving 4933434E20Rik
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 99650 NCBI Gene Model | MGI Sequence Detail 11706 C57BL/6J ±  kb
transcript NM_001287087 RefSeq | MGI Sequence Detail 2667 C57BL/6  
polypeptide NP_080038 RefSeq | MGI Sequence Detail 253 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 78
    cDNA 78

    Microarray probesets 7
Other
Accession IDs
less
MGI:1917914, MGI:2139731
References
more
  • Summaries
    All 32
    Diseases 1
    Phenotypes 14
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:261316 Perez-Garcia V, et al., Placentation defects are highly prevalent in embryonic lethal mouse mutants. Nature. 2018 Mar 22;555(7697):463-468

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory