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Pacrgl Gene Detail
Summary
  • Symbol
    Pacrgl
  • Name
    PARK2 co-regulated-like
  • Synonyms
    4933428G09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914018
    NCBI Gene: 66768
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:48372335-48388845 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 26.25 cM, cytoband B3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    145 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914018
protein coding gene Chr5:48372335-48388845 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    PACRGL, parkin coregulated like
  • Vertebrate Orthologs
    9
  • Human Ortholog
    PACRGL, parkin coregulated like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C4orf28
  • Links
    NCBI Gene ID: 133015
    neXtProt AC: NX_Q8N7B6
    UniProt: Q8N7B6

  • Chr Location
    4p15.31; chr4:20696282-20757766 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 12030
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: PACRGL
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    19 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66768 NCBI Gene Model | MGI Sequence Detail 16511 C57BL/6J ±  kb
transcript NM_025755 RefSeq | MGI Sequence Detail 1464 C57BL/6  
polypeptide NP_080031 RefSeq | MGI Sequence Detail 248 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 29
    cDNA 29

    Microarray probesets 3
References
more
  • Summaries
    All 37
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 19
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:265666 Fratta P, et al., Mice with endogenous TDP-43 mutations exhibit gain of splicing function and characteristics of amyotrophic lateral sclerosis. EMBO J. 2018 Jun 1;37(11)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory