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Tmem239 Gene Detail
Summary
  • Symbol
    Tmem239
  • Name
    transmembrane 239
  • Synonyms
    4933425O20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914016
    NCBI Gene: 66766
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:130406522-130407794 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 63.22 cM, cytoband F3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914016
protein coding gene Chr2:130406478-130407902 (.)
129S1/SvImJ MGP_129S1SvImJ_G0026503
protein coding gene Chr2:133865208-133866641 (+)
A/J MGP_AJ_G0026467
protein coding gene Chr2:128445719-128447143 (+)
AKR/J MGP_AKRJ_G0026442
protein coding gene Chr2:132144854-132146283 (+)
BALB/cJ MGP_BALBcJ_G0026479
protein coding gene Chr2:128800996-128801923 (+)
C3H/HeJ MGP_C3HHeJ_G0026222
protein coding gene Chr2:132580753-132582182 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026924
protein coding gene Chr2:138005792-138007213 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024301
protein coding gene Chr2:123189023-123189948 (+)
CAST/EiJ MGP_CASTEiJ_G0025683
protein coding gene Chr2:132836982-132837913 (+)
CBA/J MGP_CBAJ_G0026202
protein coding gene Chr2:143107038-143108467 (+)
DBA/2J MGP_DBA2J_G0026336
protein coding gene Chr2:127831816-127833237 (+)
FVB/NJ MGP_FVBNJ_G0026300
protein coding gene Chr2:126457526-126458955 (+)
LP/J MGP_LPJ_G0026441
protein coding gene Chr2:134117521-134118984 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026320
protein coding gene Chr2:146963108-146964541 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026979
protein coding gene Chr2:132106636-132108069 (+)
PWK/PhJ MGP_PWKPhJ_G0025419
protein coding gene Chr2:127388238-127389168 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025221
protein coding gene Chr2:131228670-131229627 (+)
WSB/EiJ MGP_WSBEiJ_G0025757
protein coding gene Chr2:133027878-133029307 (+)



Homology
more
  • Human Ortholog
    TMEM239, transmembrane protein 239
  • Vertebrate Orthologs
    7
  • Human Ortholog
    TMEM239, transmembrane protein 239
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100288797
    neXtProt AC: NX_Q8WW34
    UniProt: Q8WW34

  • Chr Location
    chr20:2815871-2820284 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Tmem239
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66766 NCBI Gene Model | MGI Sequence Detail 1273 C57BL/6J ±  kb
transcript NM_025753 RefSeq | MGI Sequence Detail 1170 Not Specified  
polypeptide Q9DA47 UniProt | EBI | MGI Sequence Detail 151 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR031694 Transmembrane protein 239
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory