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Tmem239 Gene Detail
Summary
  • Symbol
    Tmem239
  • Name
    transmembrane 239
  • Synonyms
    4933425O20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914016
    NCBI Gene: 66766
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:130248442-130249714 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 63.22 cM, cytoband F3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    100 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914016
 protein coding gene Chr2:130248398-130249822 (+)
129S1/SvImJ ENSMUSG00200047406
 protein coding gene Chr2:127289899-127291334 (+)
A/J ENSMUSG00195027626
 protein coding gene Chr2:127324351-127325775 (+)
AKR/J ENSMUSG00220039622
 protein coding gene Chr2:127083438-127084872 (+)
BALB/cJ ENSMUSG00180048636
 protein coding gene Chr2:127136093-127137143 (+)
C3H/HeJ ENSMUSG00175046192
 protein coding gene Chr2:127670778-127672207 (+)
C57BL/6NJ ENSMUSG00215031444
 protein coding gene Chr2:127172432-127173856 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024301
 protein coding gene Chr2:123189023-123189948 (+)
CAST/EiJ ENSTCUG00005037841
 protein coding gene Chr2:126444518-126445568 (+)
CBA/J ENSMUSG00210034704
 protein coding gene Chr2:127527665-127529094 (+)
DBA/2J ENSMUSG00185031445
 protein coding gene Chr2:127177299-127178724 (+)
FVB/NJ ENSMUSG00205037216
 protein coding gene Chr2:126342784-126344213 (+)
JF1/MsJ ENSUMUG00000018456
 protein coding gene Chr2:126989345-126990394 (+)
LP/J ENSMUSG00230036242
 protein coding gene Chr2:128925112-128926545 (+)
NOD/ShiLtJ ENSMUSG00190014036
 protein coding gene Chr2:127283395-127284828 (+)
NZO/HlLtJ ENSMUSG00225026850
 protein coding gene Chr2:136833949-136835382 (+)
PWK/PhJ ENSLUMG00010036856
 protein coding gene Chr2:126951609-126952658 (+)
SPRET/EiJ ENSMSPG00010026487
 protein coding gene Chr2:129330774-129332216 (+)
WSB/EiJ ENSIUOG00005037318
 protein coding gene Chr2:127105095-127106528 (+)



Homology
more
  • Human Ortholog
    TMEM239, transmembrane protein 239
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM239, transmembrane protein 239
  • Links
    NCBI Gene ID: 100288797
    UniProt: Q8WW34

  • Chr Location
    chr20:2815784-2820284 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Tmem239
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    8
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66766 NCBI Gene Model | MGI Sequence Detail 1273 C57BL/6J ±  kb
transcript NM_025753 RefSeq | MGI Sequence Detail 1170 Not Specified  
polypeptide Q9DA47 UniProt | EBI | MGI Sequence Detail 151 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 1
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory