About   Help   FAQ
Cfap36 Gene Detail
Summary
  • Symbol
    Cfap36
  • Name
    cilia and flagella associated protein 36
  • Synonyms
    4931428D14Rik, Ccdc104
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913994
    NCBI Gene: 216618
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:29171532-29197409 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 16.46 cM, cytoband A4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    533 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913994
 protein coding gene Chr11:29168912-29197409 (-)
129S1/SvImJ ENSMUSG00200008755
 protein coding gene Chr11:26204115-26230048 (-)
A/J ENSMUSG00195013552
 protein coding gene Chr11:26108766-26134467 (-)
AKR/J ENSMUSG00220008235
 protein coding gene Chr11:26290793-26334901 (-)
BALB/cJ ENSMUSG00180007773
 protein coding gene Chr11:26116973-26149975 (-)
C3H/HeJ ENSMUSG00175015230
 protein coding gene Chr11:26136402-26162103 (-)
C57BL/6NJ ENSMUSG00215006989
 protein coding gene Chr11:26075299-26101225 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016155
 protein coding gene Chr11:24870950-24897779 (-)
CAST/EiJ ENSTCUG00005027919
 protein coding gene Chr11:25979337-26005050 (-)
CBA/J ENSMUSG00210009785
 protein coding gene Chr11:26086589-26112521 (-)
DBA/2J ENSMUSG00185017680
 protein coding gene Chr11:26194949-26220637 (-)
FVB/NJ ENSMUSG00205018271
 protein coding gene Chr11:26172987-26205974 (-)
JF1/MsJ ENSUMUG00000009732
 protein coding gene Chr11:26440599-26466329 (-)
LP/J ENSMUSG00230014011
 protein coding gene Chr11:27327089-27371186 (-)
NOD/ShiLtJ ENSMUSG00190024208
 protein coding gene Chr11:26309400-26342400 (-)
NZO/HlLtJ ENSMUSG00225020427
 protein coding gene Chr11:29273967-29306139 (-)
PWK/PhJ ENSLUMG00010017125
 protein coding gene Chr11:26091540-26117232 (-)
SPRET/EiJ ENSMSPG00010019644
 protein coding gene Chr11:26401231-26431228 (-)
WSB/EiJ ENSIUOG00005012782
 protein coding gene Chr11:26168990-26200769 (-)



Homology
more
  • Human Ortholog
    CFAP36, cilia and flagella associated protein 36
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CFAP36, cilia and flagella associated protein 36
  • Synonyms
    BARTL1, CCDC104
  • Links
    NCBI Gene ID: 112942
    UniProt: Q96G28

  • Chr Location
    2p16.1; chr2:55519559-55545080 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    609
  • Tissues
    6
  • cDNA Data
    51
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020462 Ensembl Gene Model | MGI Sequence Detail 25878 C57BL/6J ±  kb
    transcript ENSMUST00000020754 Ensembl | MGI Sequence Detail 1664 Not Applicable  
    polypeptide ENSMUSP00000020754 Ensembl | MGI Sequence Detail 343 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 54
      Genomic 1
      cDNA 53

      Microarray probesets 3
    References
    more
    • Summaries
      All 42
      Developmental Gene Expression 1
      Gene Ontology 8
      Phenotypes 10
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory