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Henmt1 Gene Detail
Summary
  • Symbol
    Henmt1
  • Name
    HEN1 methyltransferase homolog 1 (Arabidopsis)
  • Synonyms
    4921515J06Rik, Hen1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913965
    NCBI Gene: 66715
Location & Maps
more
  • Sequence Map
    Chr3:108939873-108960774 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      20902 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 47.99 cM, cytoband G1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    HENMT1, HEN1 methyltransferase homolog 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    HENMT1, HEN1 methyltransferase homolog 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf59, HEN1
  • Links
    NCBI Gene ID: 113802
    neXtProt AC: NX_Q5T8I9

  • Chr Location
    1p13.3; chr1:108648288-108661526 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 32638
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: HENMT1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Henmt1
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007288 VEGA Gene Model | MGI Sequence Detail 20902 C57BL/6J ±  kb
transcript OTTMUST00000016844 VEGA | MGI Sequence Detail 1998 Not Applicable  
polypeptide OTTMUSP00000007758 VEGA | MGI Sequence Detail 395 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    72 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory