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Ccnh Gene Detail
Summary
  • Symbol
    Ccnh
  • Name
    cyclin H
  • Synonyms
    6330408H09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913921
    NCBI Gene: 66671
  • Gene Overview
    MyGene.info: CCNH
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:85189377-85213723 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 45.05 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    223 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913921
protein coding gene Chr13:85189377-85223469 (.)
129S1/SvImJ MGP_129S1SvImJ_G0020795
protein coding gene Chr13:86112658-86150794 (+)
A/J MGP_AJ_G0020749
protein coding gene Chr13:83077433-83111523 (+)
AKR/J MGP_AKRJ_G0020722
protein coding gene Chr13:85514069-85549515 (+)
BALB/cJ MGP_BALBcJ_G0020745
protein coding gene Chr13:83626757-83666532 (+)
C3H/HeJ MGP_C3HHeJ_G0020539
protein coding gene Chr13:85213028-85246990 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021182
protein coding gene Chr13:88840067-88875391 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018750
protein coding gene Chr13:79384681-79418671 (+)
CAST/EiJ MGP_CASTEiJ_G0020057
protein coding gene Chr13:84371293-84409563 (+)
CBA/J MGP_CBAJ_G0020498
protein coding gene Chr13:92183277-92220755 (+)
DBA/2J MGP_DBA2J_G0020623
protein coding gene Chr13:82700257-82736264 (+)
FVB/NJ MGP_FVBNJ_G0020603
protein coding gene Chr13:81740782-81774807 (+)
LP/J MGP_LPJ_G0020696
protein coding gene Chr13:86317255-86359001 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020632
protein coding gene Chr13:91540880-91584471 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021222
protein coding gene Chr13:84919130-84953008 (+)
PWK/PhJ MGP_PWKPhJ_G0019810
protein coding gene Chr13:81603334-81638542 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019633
protein coding gene Chr13:81257354-81298350 (+)
WSB/EiJ MGP_WSBEiJ_G0020115
protein coding gene Chr13:85403022-85438546 (+)



Homology
more
  • Human Ortholog
    CCNH, cyclin H
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCNH, cyclin H
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CAK, CycH, p34, p37
  • Links
    NCBI Gene ID: 902
    neXtProt AC: NX_P51946
    UniProt: P51946

  • Chr Location
    5q14.3; chr5:87311480-87413033 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66671 NCBI Gene Model | MGI Sequence Detail 24347 C57BL/6J ±  kb
transcript NM_023243 RefSeq | MGI Sequence Detail 2094 C57BL/6  
polypeptide Q61458 UniProt | EBI | MGI Sequence Detail 323 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 57
    cDNA 56
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:2145279, MGI:2145393, MGI:2145437
References
more
  • Summaries
    All 42
    Developmental Gene Expression 6
    Gene Ontology 6
    Phenotypes 7
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:246477 Talchai SC, et al., Legacy Effect of Foxo1 in Pancreatic Endocrine Progenitors on Adult beta-Cell Mass and Function. Diabetes. 2015 Aug;64(8):2868-79

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory