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Nipa2 Gene Detail
Summary
  • Symbol
    Nipa2
  • Name
    non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
  • Synonyms
    2600017P10Rik, 3830408P04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913918
    NCBI Gene: 93790
  • Gene Overview
    MyGene.info: NIPA2
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:55931287-55962476 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 33.42 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    223 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913918
protein coding gene Chr7:55931266-55962493 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032314
protein coding gene Chr7:56744220-56768458 (-)
A/J MGP_AJ_G0032293
protein coding gene Chr7:55890907-55915330 (-)
AKR/J MGP_AKRJ_G0032229
protein coding gene Chr7:57200380-57224447 (-)
BALB/cJ MGP_BALBcJ_G0032305
protein coding gene Chr7:55499917-55524358 (-)
C3H/HeJ MGP_C3HHeJ_G0032018
protein coding gene Chr7:57537629-57561702 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032798
protein coding gene Chr7:59312263-59340557 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029805
protein coding gene Chr7:58559913-58583142 (-)
CAST/EiJ MGP_CASTEiJ_G0031347
protein coding gene Chr7:48745333-48772234 (-)
CBA/J MGP_CBAJ_G0031983
protein coding gene Chr7:61356825-61385465 (-)
DBA/2J MGP_DBA2J_G0032140
protein coding gene Chr7:54915587-54939872 (-)
FVB/NJ MGP_FVBNJ_G0032094
protein coding gene Chr7:54862012-54887853 (-)
LP/J MGP_LPJ_G0032221
protein coding gene Chr7:57801979-57828888 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032131
protein coding gene Chr7:60880366-60907658 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032815
protein coding gene Chr7:56178828-56206669 (-)
PWK/PhJ MGP_PWKPhJ_G0031067
protein coding gene Chr7:48170859-48195802 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030908
protein coding gene Chr7:44229835-44257277 (-)
WSB/EiJ MGP_WSBEiJ_G0031465
protein coding gene Chr7:56818174-56843046 (-)



Homology
more
  • Human Ortholog
    NIPA2, NIPA magnesium transporter 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NIPA2, NIPA magnesium transporter 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    SLC57A2
  • Links
    NCBI Gene ID: 81614
    neXtProt AC: NX_Q8N8Q9
    UniProt: Q8N8Q9

  • Chr Location
    15q11.2; chr15:22838641-22868384 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11368
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: NIPA2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030452 Ensembl Gene Model | MGI Sequence Detail 31190 C57BL/6J ±  kb
transcript ENSMUST00000119041 Ensembl | MGI Sequence Detail 2979 Not Applicable  
polypeptide ENSMUSP00000112394 Ensembl | MGI Sequence Detail 359 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    cDNA 19

    Microarray probesets 7
Other
Accession IDs
less
MGI:1919319, MGI:1930918
References
more
  • Summaries
    All 35
    Gene Ontology 6
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory