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Tmem41a Gene Detail
Summary
  • Symbol
    Tmem41a
  • Name
    transmembrane protein 41a
  • Synonyms
    2900010K02Rik, 5730578N08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913914
    NCBI Gene: 66664
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:21934327-21947552 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 12.94 cM, cytoband B1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913914
protein coding gene Chr16:21934326-21947552 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022663
protein coding gene Chr16:19394932-19403865 (-)
A/J MGP_AJ_G0022625
protein coding gene Chr16:18458137-18468560 (-)
AKR/J MGP_AKRJ_G0022600
protein coding gene Chr16:19230500-19237753 (-)
BALB/cJ MGP_BALBcJ_G0022629
protein coding gene Chr16:18656674-18664287 (-)
C3H/HeJ MGP_C3HHeJ_G0022394
protein coding gene Chr16:19333335-19340441 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023080
protein coding gene Chr16:19797140-19804105 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020598
protein coding gene Chr16:19161718-19168720 (-)
CAST/EiJ MGP_CASTEiJ_G0021924
protein coding gene Chr16:19317782-19324540 (-)
CBA/J MGP_CBAJ_G0022366
protein coding gene Chr16:20619738-20627723 (-)
DBA/2J MGP_DBA2J_G0022498
protein coding gene Chr16:18443717-18450728 (-)
FVB/NJ MGP_FVBNJ_G0022473
protein coding gene Chr16:18413496-18426689 (-)
LP/J MGP_LPJ_G0022565
protein coding gene Chr16:19143910-19150991 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022493
protein coding gene Chr16:20220416-20229183 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023091
protein coding gene Chr16:19173912-19183114 (-)
PWK/PhJ MGP_PWKPhJ_G0021664
protein coding gene Chr16:18678038-18684912 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021494
protein coding gene Chr16:18958616-18965401 (-)
WSB/EiJ MGP_WSBEiJ_G0021967
protein coding gene Chr16:19143568-19150367 (-)



Homology
more
  • Human Ortholog
    TMEM41A, transmembrane protein 41A
  • Vertebrate Orthologs
    11
  • Human Ortholog
    TMEM41A, transmembrane protein 41A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    2900010K02Rik
  • Links
    NCBI Gene ID: 90407
    neXtProt AC: NX_Q96HV5
    UniProt: Q96HV5

  • Chr Location
    3q27.2; chr3:185482671-185499057 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
Phenotypic analysis of mice homozygous for a gene trap allele indicates this mutation has no notable phenotype in any parameter tested.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66664 NCBI Gene Model | MGI Sequence Detail 13226 C57BL/6J ±  kb
transcript NM_025693 RefSeq | MGI Sequence Detail 1359 C57BL/6  
polypeptide Q9D8U2 UniProt | EBI | MGI Sequence Detail 264 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 27

    Microarray probesets 3
Other
Accession IDs
less
MGI:1920138
References
more
  • Summaries
    All 24
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/13/2020
MGI 6.16
The Jackson Laboratory