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Tex12
Gene Detail
 Symbol
Name
ID
Tex12
testis expressed gene 12
MGI:1913904
Synonyms 5730518K06Rik
Feature Type protein coding gene
Genetic Map
Chromosome 9
27.75 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:50557148-50561268 bp, - strand
From NCBI annotation of GRCm38

  4121 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12007  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Tex12

Human
homologs
Human Homolog TEX12, testis expressed 12
NCBI Gene ID 56158
neXtProt AC  NX_Q9BXU0
Human Chr (Location)  11q22; chr11:112167372-112172556 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a knockout allele exhibit infertility associated with failure of crossover events during meiosis.
 
Interactions
Tex12 interacts with 42 markers (Mir32, Mir103-1, Mir103-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process meiotic DNA repair synthesis, synaptonemal complex assembly
Component central element, synaptonemal complex
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (2)    Tissues (1)   
Theiler Stages: 28
Assay TypeResults
RT-PCR 2
cDNA source data(13)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(13) Primer pair(2)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000032065 (Evidence)
Entrez Gene66654 (Evidence)
UniGene442255
DFCITC1585575, TC1593130
DoTSDT.522517, DT.94164731
NIA Mouse Gene IndexU030841
Consensus CDS ProjectCCDS40621.1
International Mouse Knockout Project StatusTex12
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 66654 NCBI Gene Model | MGI Sequence Detail 4121 C57BL/6J ±  kb
transcript NM_025687 RefSeq | MGI Sequence Detail 647 Not Specified 
polypeptide Q9CR81 UniProt | EBI | MGI Sequence Detail 123 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(74 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000016250 testis-expressed sequence 12 protein
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:208310 Fraune J, et al., Phylogenies of central element proteins reveal the dynamic evolutionary history of the mammalian synaptonemal complex: ancient and recent components. Genetics. 2013 Nov;195(3):781-93
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory