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Tex12
Gene Detail
Symbol

Name
ID
Tex12
testis expressed gene 12
MGI:1913904
Synonyms
5730518K06Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 9
27.75 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:50557148-50561268 bp, - strand
From NCBI annotation of GRCm38

  4121 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12007  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

HCOP human homology predictions: TEX12
Gene Tree: Tex12

Human
homologs
TEX12, testis expressed 12
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 56158
neXtProt AC: NX_Q9BXU0

Human Chr (Location): 11q22; chr11:112167372-112172556 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
 
Mice homozygous for a knockout allele exhibit infertility associated with failure of crossover events during meiosis.
 
Interactions
Tex12 interacts with 42 markers (Mir32, Mir103-1, Mir103-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process meiotic DNA repair synthesis, synaptonemal complex assembly
Component central element, synaptonemal complex
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (2)    Tissues (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RT-PCR 2
cDNA source data(13)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(13) Primer pair(2)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000032065 (Evidence)
Entrez Gene 66654 (Evidence)
UniGene 442255
DFCI TC1585575, TC1593130
DoTS DT.522517, DT.94164731
NIA Mouse Gene Index U030841
Consensus CDS Project CCDS40621.1
International Mouse Phenotyping Consortium Status Tex12
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 66654 NCBI Gene Model | MGI Sequence Detail 4121 C57BL/6J ±  kb
transcript NM_025687 RefSeq | MGI Sequence Detail 647 Not Specified 
polypeptide Q9CR81 UniProt | EBI | MGI Sequence Detail 123 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(74 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR029193 Testis-expressed sequence 12 protein
Protein Ontology PR:000016250 testis-expressed sequence 12 protein
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:211663 Fukuda T, et al., STAG3-mediated stabilization of REC8 cohesin complexes promotes chromosome synapsis during meiosis. EMBO J. 2014 Jun 2;33(11):1243-55
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory