About   Help   FAQ
Esf1 Gene Detail
Summary
  • Symbol
    Esf1
  • Name
    ESF1 nucleolar pre-rRNA processing protein homolog
  • Synonyms
    2610101J03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913830
    NCBI Gene: 66580
  • Gene Overview
    MyGene.info: ESF1
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:140119881-140170558 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 69.20 cM, cytoband G3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    301 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913830
protein coding gene Chr2:140119881-140170564 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026567
protein coding gene Chr2:144043788-144098386 (-)
A/J MGP_AJ_G0026531
protein coding gene Chr2:138218371-138272319 (-)
AKR/J MGP_AKRJ_G0026505
protein coding gene Chr2:142170853-142225332 (-)
BALB/cJ MGP_BALBcJ_G0026543
protein coding gene Chr2:138617924-138669139 (-)
C3H/HeJ MGP_C3HHeJ_G0026286
protein coding gene Chr2:142685535-142742113 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026988
protein coding gene Chr2:148369554-148421911 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024365
protein coding gene Chr2:132534058-132586155 (-)
CAST/EiJ MGP_CASTEiJ_G0025747
protein coding gene Chr2:142992405-143046112 (-)
CBA/J MGP_CBAJ_G0026266
protein coding gene Chr2:153806131-153865750 (-)
DBA/2J MGP_DBA2J_G0026400
protein coding gene Chr2:137545676-137596881 (-)
FVB/NJ MGP_FVBNJ_G0026364
protein coding gene Chr2:136113016-136163673 (-)
LP/J MGP_LPJ_G0026504
protein coding gene Chr2:144194684-144247816 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026384
protein coding gene Chr2:157816970-157885721 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027043
protein coding gene Chr2:142145778-142195832 (-)
PWK/PhJ MGP_PWKPhJ_G0025483
protein coding gene Chr2:137130213-137180626 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025285
protein coding gene Chr2:141234290-141282051 (-)
WSB/EiJ MGP_WSBEiJ_G0025821
protein coding gene Chr2:143127043-143179458 (-)



Homology
more
  • Human Ortholog
    ESF1, ESF1 nucleolar pre-rRNA processing protein homolog
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ESF1, ESF1 nucleolar pre-rRNA processing protein homolog
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ABTAP, bA526K24.1, C20orf6, HDCMC28P
  • Links
    NCBI Gene ID: 51575
    neXtProt AC: NX_Q9H501
    UniProt: Q9H501

  • Chr Location
    20p12.1; chr20:13714322-13784933 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66580 NCBI Gene Model | MGI Sequence Detail 50678 C57BL/6J ±  kb
transcript NM_001081090 RefSeq | MGI Sequence Detail 3392 Not Specified  
polypeptide Q3V1V3 UniProt | EBI | MGI Sequence Detail 845 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 70
    Genomic 1
    cDNA 68
    Other 1

    Microarray probesets 7
Other
Accession IDs
less
MGI:2139374, MGI:2139492
References
more
  • Summaries
    All 37
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 11
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory