About   Help   FAQ
Mis18a Gene Detail
Summary
  • Symbol
    Mis18a
  • Name
    MIS18 kinetochore protein A
  • Synonyms
    2610039C10Rik, 2810018N07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913828
    NCBI Gene: 66578
  • Gene Overview
    MyGene.info: MIS18A
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:90719312-90727371 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 51.87 cM, cytoband C3.3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    140 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913828
protein coding gene Chr16:90719312-90727404 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023027
protein coding gene Chr16:91676662-91689301 (-)
A/J MGP_AJ_G0022995
protein coding gene Chr16:87405740-87413832 (-)
AKR/J MGP_AKRJ_G0022965
protein coding gene Chr16:90034010-90042100 (-)
BALB/cJ MGP_BALBcJ_G0022997
protein coding gene Chr16:87925150-87934416 (-)
C3H/HeJ MGP_C3HHeJ_G0022758
protein coding gene Chr16:90602234-90610326 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023444
protein coding gene Chr16:94654569-94664965 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020946
protein coding gene Chr16:85106369-85114676 (-)
CAST/EiJ MGP_CASTEiJ_G0022277
protein coding gene Chr16:91146490-91154628 (-)
CBA/J MGP_CBAJ_G0022727
protein coding gene Chr16:98684350-98692440 (-)
DBA/2J MGP_DBA2J_G0022861
protein coding gene Chr16:87303283-87311377 (-)
FVB/NJ MGP_FVBNJ_G0022835
protein coding gene Chr16:86430304-86438404 (-)
LP/J MGP_LPJ_G0022931
protein coding gene Chr16:91369884-91377983 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022856
protein coding gene Chr16:103256388-103264488 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023462
protein coding gene Chr16:90547784-90555884 (-)
PWK/PhJ MGP_PWKPhJ_G0022022
protein coding gene Chr16:87473632-87482177 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021852
protein coding gene Chr16:90115224-90123300 (-)
WSB/EiJ MGP_WSBEiJ_G0022329
protein coding gene Chr16:90784070-90792169 (-)



Homology
more
  • Human Ortholog
    MIS18A, MIS18 kinetochore protein A
  • Vertebrate Orthologs
    10
  • Human Ortholog
    MIS18A, MIS18 kinetochore protein A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    B28, C21orf45, C21orf46, FASP1, hMis18alpha, MIS18alpha
  • Links
    NCBI Gene ID: 54069
    neXtProt AC: NX_Q9NYP9
    UniProt: Q9NYP9

  • Chr Location
    21q22.11; chr21:32244759-32283954 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 41294
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: MIS18A
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 2 alleles in 2 genetic backgrounds
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit embryonic lethality between implantation and placentation, reduced growth of the inner cell mass and degeneration, increased apoptosis, decreased DNA methylation, and abnormal mitosis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 66578 NCBI Gene Model | MGI Sequence Detail 8060 C57BL/6J ±  kb
    transcript NM_025642 RefSeq | MGI Sequence Detail 1300 C57BL/6  
    polypeptide Q9CZJ6 UniProt | EBI | MGI Sequence Detail 204 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 13
      cDNA 11
      Primer pair 2

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1924304
    References
    more
    • Summaries
      All 39
      Developmental Gene Expression 5
      Gene Ontology 5
      Phenotypes 11
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:262380 Watson-Scales S, et al., Analysis of motor dysfunction in Down Syndrome reveals motor neuron degeneration. PLoS Genet. 2018 May;14(5):e1007383

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
    Warranty Disclaimer & Copyright Notice
    Send questions and comments to User Support.
    last database update
    11/13/2018
    MGI 6.13
    The Jackson Laboratory