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Zkscan8 Gene Detail
Summary
  • Symbol
    Zkscan8
  • Name
    zinc finger with KRAB and SCAN domains 8
  • Synonyms
    2510038J07Rik, D430019P06Rik, LD5-1, Zfp192
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913815
    NCBI Gene: 93681
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:21513221-21531114 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 7.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    137 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913815
protein coding gene Chr13:21513221-21531120 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020281
protein coding gene Chr13:18783380-18799999 (-)
A/J MGP_AJ_G0020236
protein coding gene Chr13:18381837-18399760 (-)
AKR/J MGP_AKRJ_G0020213
protein coding gene Chr13:18684102-18702025 (-)
BALB/cJ MGP_BALBcJ_G0020225
protein coding gene Chr13:18424533-18442456 (-)
C3H/HeJ MGP_C3HHeJ_G0020026
protein coding gene Chr13:18767852-18785775 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020668
protein coding gene Chr13:19448624-19466498 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018275
protein coding gene Chr13:16711761-16729675 (-)
CAST/EiJ MGP_CASTEiJ_G0019562
protein coding gene Chr13:18575889-18593815 (-)
CBA/J MGP_CBAJ_G0019990
protein coding gene Chr13:20118497-20136420 (-)
DBA/2J MGP_DBA2J_G0020110
protein coding gene Chr13:18008241-18026164 (-)
FVB/NJ MGP_FVBNJ_G0020092
protein coding gene Chr13:17671736-17689659 (-)
LP/J MGP_LPJ_G0020182
protein coding gene Chr13:19035019-19052942 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020130
protein coding gene Chr13:20505469-20523392 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020696
protein coding gene Chr13:18494536-18513742 (-)
PWK/PhJ MGP_PWKPhJ_G0019325
protein coding gene Chr13:18051541-18069433 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019131
protein coding gene Chr13:17501167-17519009 (-)
WSB/EiJ MGP_WSBEiJ_G0019619
protein coding gene Chr13:18574254-18592177 (-)



Homology
more
  • Human Ortholog
    ZKSCAN8, zinc finger with KRAB and SCAN domains 8
  • Vertebrate Orthologs
    7
  • Human Ortholog
    ZKSCAN8, zinc finger with KRAB and SCAN domains 8
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LD5-1, ZNF192, ZSCAN40
  • Links
    NCBI Gene ID: 7745
    neXtProt AC: NX_Q15776
    UniProt: Q15776

  • Chr Location
    6p22.1; chr6:28141644-28159472 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
  • All Mutations and Alleles
    15
  • Chemically induced (other)
    1
  • Gene trapped
    12
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Zkscan8
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 93681 NCBI Gene Model | MGI Sequence Detail 17894 C57BL/6J ±  kb
transcript NM_139141 RefSeq | MGI Sequence Detail 8800 C57BL/6  
polypeptide NP_631880 RefSeq | MGI Sequence Detail 588 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2442768
References
more
  • Summaries
    All 37
    Developmental Gene Expression 5
    Phenotypes 14
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory