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Aggf1 Gene Detail
Summary
  • Symbol
    Aggf1
  • Name
    angiogenic factor with G patch and FHA domains 1
  • Synonyms
    2010009L17Rik, 2310029P06Rik, VG5Q
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913799
    NCBI Gene: 66549
  • Gene Overview
    MyGene.info: AGGF1
Location & Maps
more
  • Sequence Map
    Chr13:95350683-95375352 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      24670 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 49.41 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    AGGF1, angiogenic factor with G-patch and FHA domains 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    AGGF1, angiogenic factor with G-patch and FHA domains 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    GPATC7, GPATCH7, HSU84971, HUS84971, VG5Q
  • Links
    NCBI Gene ID: 55109
    neXtProt AC: NX_Q8N302

  • Chr Location
    5q13.3; chr5:77030385-77065234 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030737 VEGA Gene Model | MGI Sequence Detail 24670 C57BL/6J ±  kb
transcript OTTMUST00000076097 VEGA | MGI Sequence Detail 3249 Not Applicable  
polypeptide OTTMUSP00000040000 VEGA | MGI Sequence Detail 711 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    141 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000003830 angiogenic factor with G patch and FHA domains 1
  • InterPro Domains
    IPR000253 Forkhead-associated (FHA) domain
    IPR000467 G-patch domain
    IPR008984 SMAD/FHA domain
Molecular
Reagents
less
  • All nucleic 113
    cDNA 112
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2145413, MGI:2447861
References
more
  • Summaries
    All 33
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:28008 Harrison SM, et al., Isolation of novel tissue-specific genes from cDNA libraries representing the individual tissue constituents of the gastrulating mouse embryo. Development. 1995 Aug;121(8):2479-89
  • Latest
    J:154247 Mueller CF, et al., The heterogenous nuclear riboprotein S1-1 regulates AT1 receptor gene expression via transcriptional and posttranscriptional mechanisms. Arch Biochem Biophys. 2009 Aug 1;488(1):76-82

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory