About   Help   FAQ
Ubxn6 Gene Detail
Summary
  • Symbol
    Ubxn6
  • Name
    UBX domain protein 6
  • Synonyms
    1200008L11Rik, 2210415J11Rik, Ubxd1, Ubxdc2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913780
    NCBI Gene: 66530
  • Gene Overview
    MyGene.info: UBXN6
Location & Maps
more
  • Sequence Map
    Chr17:56067045-56075028 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7984 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 29.14 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    UBXN6, UBX domain protein 6
  • Vertebrate Orthologs
    10
  • Human Ortholog
    UBXN6, UBX domain protein 6
    Orthology source: HGNC, HomoloGene
  • Synonyms
    UBXD1, UBXDC2
  • Links
    NCBI Gene ID: 80700
    neXtProt AC: NX_Q9BZV1

  • Chr Location
    19p13; chr19:4445006-4457794 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 11538
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: UBXN6
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Gene trapped
    2
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033034 VEGA Gene Model | MGI Sequence Detail 7984 C57BL/6J ±  kb
transcript OTTMUST00000082443 VEGA | MGI Sequence Detail 2949 Not Applicable  
polypeptide OTTMUSP00000044177 VEGA | MGI Sequence Detail 442 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    20 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
Other
Accession IDs
less
MGI:1923525, MGI:2146996
References
more
  • Summaries
    All 27
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/15/2016
MGI 6.04
The Jackson Laboratory