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Prrc2c Gene Detail
Summary
  • Symbol
    Prrc2c
  • Name
    proline-rich coiled-coil 2C
  • Synonyms
    1810043M20Rik, 9630039I18Rik, Bat2d, Bat2l2, mKIAA1096
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913754
    NCBI Gene: 226562
Location & Maps
more
  • Sequence Map
    Chr1:162670725-162740556 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      69832 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 70.30 cM, cytoband H1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    PRRC2C, proline rich coiled-coil 2C
  • Vertebrate Orthologs
    7
  • Human Ortholog
    PRRC2C, proline rich coiled-coil 2C
    Orthology source: HGNC, HomoloGene
  • Synonyms
    BAT2D1, BAT2-iso, BAT2L2, XTP2
  • Links
    NCBI Gene ID: 23215
    neXtProt AC: NX_Q9Y520

  • Chr Location
    1q23.3; chr1:171485513-171593511 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    76
  • Chemically induced (other)
    2
  • Gene trapped
    74
  • Genomic Mutations
    2 involving Prrc2c
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000043447 VEGA Gene Model | MGI Sequence Detail 69832 C57BL/6J ±  kb
transcript OTTMUST00000113985 VEGA | MGI Sequence Detail 11502 Not Applicable  
polypeptide OTTMUSP00000063634 VEGA | MGI Sequence Detail 2846 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    354 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 188
    Genomic 1
    cDNA 187

    Microarray probesets 11
Other
Accession IDs
less
MGI:2443690
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:40877 Wada J, et al., Representational difference analysis of cDNA of genes expressed in embryonic kidney. Kidney Int. 1997 May;51(5):1629-38
  • Latest
    J:202604 Nagamachi A, et al., Haploinsufficiency of SAMD9L, an endosome fusion facilitator, causes myeloid malignancies in mice mimicking human diseases with monosomy 7. Cancer Cell. 2013 Sep 9;24(3):305-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory