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Rps23
Gene Detail
 Symbol
Name
ID
Rps23
ribosomal protein S23
MGI:1913725
Synonyms 2410044J15Rik
Feature Type protein coding gene
Genetic Map
Chromosome 13
46.46 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr13:90923122-90924732 bp, + strand
From NCBI annotation of GRCm38

  1611 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:799  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: ribosomal protein, S12p/S12a/S23e/organellar S12 types
Gene Tree: Rps23

Human
homologs
Human Homolog RPS23, ribosomal protein S23
NCBI Gene ID 6228
neXtProt AC  NX_P62266
Human Synonyms  S23
Human Chr (Location)  5q14.2; chr5:82273320-82278416 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(20) : Gene trapped(19) Targeted(1)
Interactions
Rps23 interacts with 42 markers (Mir30a, Mir30d, Mir30e, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process translation
Component cytoplasm, cytosolic small ribosomal subunit, ...
Function poly(A) RNA binding, structural constituent of ribosome
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(245)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(246) Genomic(1) cDNA(245)
Microarray probesets(5)
Other database
links
Ensembl Gene ModelENSMUSG00000049517 (Evidence)
Entrez Gene66475 (Evidence)
UniGene306302
DFCITC1573852
DoTSDT.101369277, DT.101369533, DT.101720627, DT.495595
Consensus CDS ProjectCCDS26674.1
International Mouse Knockout Project StatusRps23
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 66475 NCBI Gene Model | MGI Sequence Detail 1611 C57BL/6J ±  kb
transcript NM_024175 RefSeq | MGI Sequence Detail 572 C57BL/6 
polypeptide P62267 UniProt | EBI | MGI Sequence Detail 143 Not Applicable 

For the selected sequences
All sequences(37) RefSeq(2) UniProt(5)
Polymorphisms SNPs within 2kb(84 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012340 Nucleic acid-binding, OB-fold
InterPro IPR006032 Ribosomal protein S12/S23
InterPro IPR005680 Ribosomal protein S23, eukaryotic/archaeal
Protein Ontology PR:000014266 40S ribosomal protein S23
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory