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Cyc1 Gene Detail
Summary
  • Symbol
    Cyc1
  • Name
    cytochrome c-1
  • Synonyms
    2610002H19Rik, Cyct1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913695
    NCBI Gene: 66445
  • Gene Overview
    MyGene.info: CYC1
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:76343523-76345934 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 35.74 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913695
protein coding gene Chr15:76343523-76346260 (.)
129S1/SvImJ MGP_129S1SvImJ_G0021985
protein coding gene Chr15:76414665-76417076 (+)
A/J MGP_AJ_G0021943
protein coding gene Chr15:73631504-73633915 (+)
AKR/J MGP_AKRJ_G0021926
protein coding gene Chr15:75633166-75635577 (+)
BALB/cJ MGP_BALBcJ_G0021952
protein coding gene Chr15:73659242-73661653 (+)
C3H/HeJ MGP_C3HHeJ_G0021724
protein coding gene Chr15:75674801-75677249 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022392
protein coding gene Chr15:79266709-79269802 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019921
protein coding gene Chr15:70291905-70294310 (+)
CAST/EiJ MGP_CASTEiJ_G0021243
protein coding gene Chr15:76473530-76475941 (+)
CBA/J MGP_CBAJ_G0021691
protein coding gene Chr15:81775653-81778064 (+)
DBA/2J MGP_DBA2J_G0021816
protein coding gene Chr15:73167279-73169724 (+)
FVB/NJ MGP_FVBNJ_G0021797
protein coding gene Chr15:72217217-72219628 (+)
LP/J MGP_LPJ_G0021887
protein coding gene Chr15:76505012-76507423 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021821
protein coding gene Chr15:87112238-87114649 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022412
protein coding gene Chr15:75873096-75875507 (+)
PWK/PhJ MGP_PWKPhJ_G0020984
protein coding gene Chr15:73325291-73327702 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020824
protein coding gene Chr15:75594398-75596809 (+)
WSB/EiJ MGP_WSBEiJ_G0021295
protein coding gene Chr15:75975993-75978404 (+)



Homology
more
  • Human Ortholog
    CYC1, cytochrome c1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CYC1, cytochrome c1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MC3DN6, UQCR4
  • Links
    NCBI Gene ID: 1537
    neXtProt AC: NX_P08574
    UniProt: P08574

  • Chr Location
    8q24.3; chr8:144095035-144097527 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human CYC1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    27 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66445 NCBI Gene Model | MGI Sequence Detail 2412 C57BL/6J ±  kb
transcript NM_025567 RefSeq | MGI Sequence Detail 1534 C57BL/6  
polypeptide Q9D0M3 UniProt | EBI | MGI Sequence Detail 325 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 252
    cDNA 251
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2145898
References
more
  • Summaries
    All 64
    Developmental Gene Expression 6
    Diseases 1
    Gene Ontology 11
    Phenotypes 27
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory