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2410004B18Rik Gene Detail
Summary
  • Symbol
    2410004B18Rik
  • Name
    RIKEN cDNA 2410004B18 gene
  • Synonyms
    4930572C24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913671
    NCBI Gene: 66421
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:145938014-145944829 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 71.03 cM, cytoband H3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913671
protein coding gene Chr3:145938004-145944829 (.)
129S1/SvImJ MGP_129S1SvImJ_G0027964
protein coding gene Chr3:149394915-149401731 (+)
A/J MGP_AJ_G0027923
protein coding gene Chr3:144072257-144079073 (+)
AKR/J MGP_AKRJ_G0027889
protein coding gene Chr3:147898296-147905112 (+)
BALB/cJ MGP_BALBcJ_G0027935
protein coding gene Chr3:143890017-143896833 (+)
C3H/HeJ MGP_C3HHeJ_G0027665
protein coding gene Chr3:148269092-148275908 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028378
protein coding gene Chr3:154459691-154466506 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025716
protein coding gene Chr3:139147113-139153935 (+)
CAST/EiJ MGP_CASTEiJ_G0027118
protein coding gene Chr3:148228393-148235198 (+)
CBA/J MGP_CBAJ_G0027640
protein coding gene Chr3:159885175-159891991 (+)
DBA/2J MGP_DBA2J_G0027780
protein coding gene Chr3:143212054-143218869 (+)
FVB/NJ MGP_FVBNJ_G0027747
protein coding gene Chr3:140622786-140629601 (+)
LP/J MGP_LPJ_G0027891
protein coding gene Chr3:150788779-150795595 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027780
protein coding gene Chr3:168191715-168198531 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028437
protein coding gene Chr3:147494723-147501539 (+)
PWK/PhJ MGP_PWKPhJ_G0026841
protein coding gene Chr3:143060056-143066948 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026669
protein coding gene Chr3:145656553-145663541 (+)
WSB/EiJ MGP_WSBEiJ_G0027198
protein coding gene Chr3:148451774-148458597 (+)



Homology
more
  • Human Ortholog
    C1orf52, chromosome 1 open reading frame 52
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C1orf52, chromosome 1 open reading frame 52
    Orthology source: HomoloGene, HGNC
  • Synonyms
    gm117
  • Links
    NCBI Gene ID: 148423
    neXtProt AC: NX_Q8N6N3
    UniProt: Q8N6N3

  • Chr Location
    1p22.3; chr1:85249953-85259672 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036873 Ensembl Gene Model | MGI Sequence Detail 6816 C57BL/6J ±  kb
transcript ENSMUST00000039571 Ensembl | MGI Sequence Detail 1547 Not Applicable  
polypeptide ENSMUSP00000045376 Ensembl | MGI Sequence Detail 180 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR029089 Protein of unknown function DUF4660
Molecular
Reagents
less
  • All nucleic 9
    Genomic 1
    cDNA 8

    Microarray probesets 5
Other
Accession IDs
less
MGI:1925311
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory