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Rsl1d1 Gene Detail
Summary
  • Symbol
    Rsl1d1
  • Name
    ribosomal L1 domain containing 1
  • Synonyms
    2410005K20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913659
    NCBI Gene: 66409
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:11010901-11021156 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 6.37 cM, cytoband B1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    364 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913659
 protein coding gene Chr16:11010834-11021195 (-)
129S1/SvImJ ENSMUSG00200011566
 protein coding gene Chr16:8016428-8026789 (-)
A/J ENSMUSG00195011458
 protein coding gene Chr16:7554504-7564866 (-)
AKR/J ENSMUSG00220016687
 protein coding gene Chr16:7843315-7853678 (-)
BALB/cJ ENSMUSG00180007904
 protein coding gene Chr16:7793710-7804073 (-)
C3H/HeJ ENSMUSG00175026965
 protein coding gene Chr16:7984587-7994954 (-)
C57BL/6NJ ENSMUSG00215017071
 protein coding gene Chr16:7660379-7670740 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020457
 protein coding gene Chr16:7780598-7787377 (-)
CAST/EiJ ENSTCUG00005029370
 protein coding gene Chr16:7916671-7927046 (-)
CBA/J ENSMUSG00210011409
 protein coding gene Chr16:8001752-8012118 (-)
DBA/2J ENSMUSG00185009351
 protein coding gene Chr16:7947086-7957452 (-)
FVB/NJ ENSMUSG00205011036
 protein coding gene Chr16:7863738-7874101 (-)
JF1/MsJ ENSUMUG00000027678
 protein coding gene Chr16:8070618-8081302 (-)
LP/J ENSMUSG00230043203
 protein coding gene Chr16:10512185-10522547 (-)
NOD/ShiLtJ ENSMUSG00190023985
 protein coding gene Chr16:8045899-8056260 (-)
NZO/HlLtJ ENSMUSG00225030196
 protein coding gene Chr16:13730194-13740555 (-)
PWK/PhJ ENSLUMG00010017145
 protein coding gene Chr16:7922861-7933528 (-)
SPRET/EiJ ENSMSPG00010015649
 protein coding gene Chr16:7888933-7899334 (-)
WSB/EiJ ENSIUOG00005015217
 protein coding gene Chr16:8011112-8021478 (-)



Homology
more
  • Human Ortholog
    RSL1D1, ribosomal L1 domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RSL1D1, ribosomal L1 domain containing 1
  • Synonyms
    Cic1, CSIG, L12, PBK1, UTP30
  • Links
    NCBI Gene ID: 26156
    UniProt: O76021

  • Chr Location
    16p13.13; chr16:11833850-11851586 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    23
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    611
  • Tissues
    14
  • cDNA Data
    238
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66409 NCBI Gene Model | MGI Sequence Detail 10256 C57BL/6J ±  kb
transcript NM_025546 RefSeq | MGI Sequence Detail 1839 C57BL/6  
polypeptide Q8BVY0 UniProt | EBI | MGI Sequence Detail 452 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    12 Sequences
  • Protein Ontology
    PR:000029723 ribosomal L1 domain-containing protein 1
    (term hierarchy)
  • InterPro Domains
    IPR050257 Large ribosomal subunit protein eL8/uL1-like
    IPR016095 Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain
    IPR023674 Ribosomal protein uL1-like
    IPR028364 Ribosomal protein uL1/ribosomal biogenesis protein
  • GlyGen
    Q8BVY0 3 sites, 2 N-linked glycans (2 sites), 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 239
    cDNA 238
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2146694
References
more
  • Summaries
    All 40
    Developmental Gene Expression 1
    Gene Ontology 8
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:332890 Wang W, et al., Karyopherin alpha deficiency contributes to human preimplantation embryo arrest. J Clin Invest. 2023 Jan 17;133(2)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory