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Alkbh7 Gene Detail
Summary
  • Symbol
    Alkbh7
  • Name
    alkB homolog 7
  • Synonyms
    2310045B01Rik, 2510008E23Rik, Abh7, Spata11
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913650
    NCBI Gene: 66400
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:56997339-56999322 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 29.61 cM, cytoband E1.1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913650
protein coding gene Chr17:56997339-56999340 (.)
129S1/SvImJ MGP_129S1SvImJ_G0023946
protein coding gene Chr17:58741718-58743703 (+)
A/J MGP_AJ_G0023904
protein coding gene Chr17:57118661-57120645 (+)
AKR/J MGP_AKRJ_G0023873
protein coding gene Chr17:57841540-57843523 (+)
BALB/cJ MGP_BALBcJ_G0023905
protein coding gene Chr17:56959117-56961100 (+)
C3H/HeJ MGP_C3HHeJ_G0023669
protein coding gene Chr17:58563788-58565771 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024351
protein coding gene Chr17:61005374-61007357 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021797
protein coding gene Chr17:53598462-53600441 (+)
CAST/EiJ MGP_CASTEiJ_G0023151
protein coding gene Chr17:58852995-58854977 (+)
CBA/J MGP_CBAJ_G0023645
protein coding gene Chr17:63405160-63407142 (+)
DBA/2J MGP_DBA2J_G0023773
protein coding gene Chr17:55816262-55818245 (+)
FVB/NJ MGP_FVBNJ_G0023739
protein coding gene Chr17:55386573-55388558 (+)
LP/J MGP_LPJ_G0023855
protein coding gene Chr17:59419335-59421320 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023767
protein coding gene Chr17:62850264-62852249 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024395
protein coding gene Chr17:58202644-58204627 (+)
PWK/PhJ MGP_PWKPhJ_G0022897
protein coding gene Chr17:55184117-55186094 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022708
protein coding gene Chr17:54971835-54973810 (+)
WSB/EiJ MGP_WSBEiJ_G0023217
protein coding gene Chr17:58819059-58821042 (+)



Homology
more
  • Human Ortholog
    ALKBH7, alkB homolog 7
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ALKBH7, alkB homolog 7
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ABH7, SPATA11, UNQ6002
  • Links
    NCBI Gene ID: 84266
    neXtProt AC: NX_Q9BT30
    UniProt: Q9BT30

  • Chr Location
    19p13.3; chr19:6372433-6375250 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000002661 Ensembl Gene Model | MGI Sequence Detail 1984 C57BL/6J ±  kb
transcript ENSMUST00000002737 Ensembl | MGI Sequence Detail 917 Not Applicable  
polypeptide ENSMUSP00000002737 Ensembl | MGI Sequence Detail 221 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000003954 alpha-ketoglutarate-dependent dioxygenase alkB homolog 7
  • EC
  • InterPro Domains
    IPR032870 Alpha-ketoglutarate-dependent dioxygenase alkB homologue 7
    IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
    IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Molecular
Reagents
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  • All nucleic 39
    cDNA 39

    Microarray probesets 3
Other
Accession IDs
less
MGI:1917538
References
more
  • Summaries
    All 26
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:198968 Solberg A, et al., Deletion of mouse Alkbh7 leads to obesity. J Mol Cell Biol. 2013 Jun;5(3):194-203

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory