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2310022A10Rik Gene Detail
Summary
  • Symbol
    2310022A10Rik
  • Name
    RIKEN cDNA 2310022A10 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913617
    NCBI Gene: 66367
  • Alliance
    gene page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:27252658-27281524 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 15.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913617
 protein coding gene Chr7:27252482-27281524 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031917
 protein coding gene Chr7:26217467-26254812 (+)
A/J MGP_AJ_G0031896
 protein coding gene Chr7:25582053-25610794 (+)
AKR/J MGP_AKRJ_G0031826
 protein coding gene Chr7:26263856-26294039 (+)
BALB/cJ MGP_BALBcJ_G0031901
 protein coding gene Chr7:25796813-25825469 (+)
C3H/HeJ MGP_C3HHeJ_G0031623
 protein coding gene Chr7:26644163-26672137 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032366
 protein coding gene Chr7:27083631-27132735 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029418
 protein coding gene Chr7:26807294-26834900 (+)
CAST/EiJ MGP_CASTEiJ_G0030958
 protein coding gene Chr7:19948572-19977903 (+)
CBA/J MGP_CBAJ_G0031588
 protein coding gene Chr7:28283603-28317457 (+)
DBA/2J MGP_DBA2J_G0031740
 protein coding gene Chr7:25376966-25405228 (+)
FVB/NJ MGP_FVBNJ_G0031696
 protein coding gene Chr7:25479614-25506692 (+)
LP/J MGP_LPJ_G0031820
 protein coding gene Chr7:26547195-26579032 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031731
 protein coding gene Chr7:27847649-27883531 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032397
 protein coding gene Chr7:25806279-25837114 (+)
PWK/PhJ MGP_PWKPhJ_G0030682
 protein coding gene Chr7:20413152-20442792 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030516
 protein coding gene Chr7:16787284-16816722 (+)
WSB/EiJ MGP_WSBEiJ_G0031066
 protein coding gene Chr7:26088717-26120163 (+)



Homology
more
  • Human Ortholog
    C19orf47, chromosome 19 open reading frame 47
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C19orf47, chromosome 19 open reading frame 47
  • Links
    NCBI Gene ID: 126526
    neXtProt AC: NX_Q8N9M1
    UniProt: Q8N9M1

  • Chr Location
    19q13.2; chr19:40292743-40348527 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    631
  • cDNA Data
    44
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049643 Ensembl Gene Model | MGI Sequence Detail 28867 C57BL/6J ±  kb
transcript ENSMUST00000067386 Ensembl | MGI Sequence Detail 2701 Not Applicable  
polypeptide ENSMUSP00000066803 Ensembl | MGI Sequence Detail 413 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR040772 C19orf47, SAM domain
    IPR041477 Domain of unknown function DUF5577
    IPR013761 Sterile alpha motif/pointed domain superfamily
    IPR039161 Uncharacterized protein C19orf47-like
Molecular
Reagents
less
  • All nucleic 44
    cDNA 44

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/01/2021
MGI 6.17 		The Jackson Laboratory