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Ccdc90b Gene Detail
Summary
  • Symbol
    Ccdc90b
  • Name
    coiled-coil domain containing 90B
  • Synonyms
    2310015N07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913615
    NCBI Gene: 66365
  • Gene Overview
    MyGene.info: CCDC90B
Location & Maps
more
  • Sequence Map
    Chr7:92561149-92582294 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      21146 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 51.51 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CCDC90B, coiled-coil domain containing 90B
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC90B, coiled-coil domain containing 90B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MDS011, MDS025
  • Links
    NCBI Gene ID: 60492
    neXtProt AC: NX_Q9GZT6

  • Chr Location
    11q14.1; chr11:83259093-83286407 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    27 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    2
  • Targeted
    3
  • Genomic Mutations
    3 involving Ccdc90b
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031425 VEGA Gene Model | MGI Sequence Detail 21146 C57BL/6J ±  kb
transcript OTTMUST00000077861 VEGA | MGI Sequence Detail 1596 Not Applicable  
polypeptide OTTMUSP00000041274 VEGA | MGI Sequence Detail 256 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    148 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000029322 coiled-coil domain-containing protein 90B, mitochondrial
  • InterPro Domains
    IPR024461 Coiled-coil domain-containing protein 90-like
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142368
References
more
  • Summaries
    All 27
    Gene Ontology 3
    Phenotypes 27
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory