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Atp5sl
Gene Detail
Symbol

Name
ID
Atp5sl
ATP5S-like
MGI:1913599
Synonyms
2310004L02Rik, C030044E10Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 7
13.93 cM, cytoband A3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr7:25619414-25625551 bp, + strand
From VEGA annotation of GRCm38

  6138 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9973  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: ATP5SL
Gene Tree: Atp5sl

Human
homologs
ATP5SL, ATP5S-like
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55101
neXtProt AC: NX_Q9NW81

Human Chr (Location): 19q13.2; chr19:41431318-41447827 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(2) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Atp5sl interacts with 79 markers (Mir18, Mir18b, Mir27a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component mitochondrion
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(58)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase atp5sl    NEW 
Molecular
reagents
All nucleic(58) cDNA(58)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000023377 (Evidence)
Ensembl Gene Model ENSMUSG00000057229 (Evidence)
Entrez Gene 66349 (Evidence)
UniGene 159956
DFCI TC1576633, TC1675726
DoTS DT.101400812, DT.101400814, DT.530436, DT.91562276
NIA Mouse Gene Index U253817
Consensus CDS Project CCDS20988.1, CCDS71917.1
International Mouse Phenotyping Consortium Status Atp5sl
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023377 VEGA Gene Model | MGI Sequence Detail 6138 C57BL/6J ±  kb
transcript OTTMUST00000056715 VEGA | MGI Sequence Detail 1465 Not Applicable 
polypeptide OTTMUSP00000027288 VEGA | MGI Sequence Detail 258 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(69 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026303 ATP synthase subunit s-like protein
Protein Ontology PR:000004467 ATP synthase subunit s-like protein
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)
Other
accession IDs
MGI:1924867

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory