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Krt88 Gene Detail
Summary
  • Symbol
    Krt88
  • Name
    keratin 88
  • Synonyms
    1700011A15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913572
    NCBI Gene: 66322
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr15:101447745-101453909 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      6165 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 56.90 cM, cytoband F3
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    KRT88P, keratin 88 pseudogene
  • Vertebrate Orthologs
    4
  • Human Ortholog
    KRT88P, keratin 88 pseudogene
    Orthology source: HGNC
  • Synonyms
    HBC, KRT122P, KRTHBP3
  • Links
    NCBI Gene ID: 85348

  • Chr Location
    12q13.13; chr12:52263781-52268497 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    27 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Targeted
    3
  • Genomic Mutations
    4 involving Krt88
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063971 Ensembl Gene Model | MGI Sequence Detail 6165 C57BL/6J ±  kb
transcript ENSMUST00000023781 Ensembl | MGI Sequence Detail 903 Not Applicable  
polypeptide ENSMUSP00000023781 Ensembl | MGI Sequence Detail 171 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    25 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR001664 Intermediate filament protein
    IPR018039 Intermediate filament protein, conserved site
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 42
    Diseases 1
    Phenotypes 27
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory