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1700008B11Rik Gene Detail
Summary
  • Symbol
    1700008B11Rik
  • Name
    RIKEN cDNA 1700008B11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1913571
    NCBI Gene: 66321
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:121835195-121835828 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913571
lncRNA gene Chr5:121835195-121835828 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004170
antisense lncRNA gene Chr5:125407111-125407744 (+)
A/J MGP_AJ_G0004149
antisense lncRNA gene Chr5:120249074-120249707 (+)
AKR/J MGP_AKRJ_G0004130
antisense lncRNA gene Chr5:124113959-124114592 (+)
BALB/cJ MGP_BALBcJ_G0004135
antisense lncRNA gene Chr5:121586241-121586874 (+)
C3H/HeJ MGP_C3HHeJ_G0004083
antisense lncRNA gene Chr5:124695228-124695861 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004283
antisense lncRNA gene Chr5:130188037-130188670 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003760
antisense lncRNA gene Chr5:114863977-114864582 (+)
CAST/EiJ MGP_CASTEiJ_G0004045
antisense lncRNA gene Chr5:123796019-123796624 (+)
CBA/J MGP_CBAJ_G0004077
antisense lncRNA gene Chr5:135308465-135309098 (+)
DBA/2J MGP_DBA2J_G0004093
antisense lncRNA gene Chr5:120297936-120298569 (+)
FVB/NJ MGP_FVBNJ_G0004109
antisense lncRNA gene Chr5:119262254-119262887 (+)
LP/J MGP_LPJ_G0004171
antisense lncRNA gene Chr5:125946886-125947519 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004099
antisense lncRNA gene Chr5:139129513-139130146 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004281
antisense lncRNA gene Chr5:123658751-123659384 (+)
PWK/PhJ MGP_PWKPhJ_G0003999
antisense lncRNA gene Chr5:119046351-119046984 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003942
antisense lncRNA gene Chr5:121390863-121391486 (+)
WSB/EiJ MGP_WSBEiJ_G0004082
antisense lncRNA gene Chr5:124332011-124332644 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700008B11Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104872 Ensembl Gene Model | MGI Sequence Detail 634 C57BL/6J ±  kb
transcript ENSMUST00000198145 Ensembl | MGI Sequence Detail 634 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 11
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory