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1700008B11Rik Gene Detail
Summary
  • Symbol
    1700008B11Rik
  • Name
    RIKEN cDNA 1700008B11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1913571
    NCBI Gene: 66321
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:121973258-121973891 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913571
lncRNA gene Chr5:121973258-121973891 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004170
antisense lncRNA gene Chr5:125407111-125407744 (+)
A/J MGP_AJ_G0004149
antisense lncRNA gene Chr5:120249074-120249707 (+)
AKR/J MGP_AKRJ_G0004130
antisense lncRNA gene Chr5:124113959-124114592 (+)
BALB/cJ MGP_BALBcJ_G0004135
antisense lncRNA gene Chr5:121586241-121586874 (+)
C3H/HeJ MGP_C3HHeJ_G0004083
antisense lncRNA gene Chr5:124695228-124695861 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004283
antisense lncRNA gene Chr5:130188037-130188670 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003760
antisense lncRNA gene Chr5:114863977-114864582 (+)
CAST/EiJ MGP_CASTEiJ_G0004045
antisense lncRNA gene Chr5:123796019-123796624 (+)
CBA/J MGP_CBAJ_G0004077
antisense lncRNA gene Chr5:135308465-135309098 (+)
DBA/2J MGP_DBA2J_G0004093
antisense lncRNA gene Chr5:120297936-120298569 (+)
FVB/NJ MGP_FVBNJ_G0004109
antisense lncRNA gene Chr5:119262254-119262887 (+)
LP/J MGP_LPJ_G0004171
antisense lncRNA gene Chr5:125946886-125947519 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004099
antisense lncRNA gene Chr5:139129513-139130146 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004281
antisense lncRNA gene Chr5:123658751-123659384 (+)
PWK/PhJ MGP_PWKPhJ_G0003999
antisense lncRNA gene Chr5:119046351-119046984 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003942
antisense lncRNA gene Chr5:121390863-121391486 (+)
WSB/EiJ MGP_WSBEiJ_G0004082
antisense lncRNA gene Chr5:124332011-124332644 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700008B11Rik
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104872 Ensembl Gene Model | MGI Sequence Detail 634 C57BL/6J ±  kb
transcript ENSMUST00000198145 Ensembl | MGI Sequence Detail 634 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 11
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/23/2022
MGI 6.20
The Jackson Laboratory