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Tpd52l2 Gene Detail
Summary
  • Symbol
    Tpd52l2
  • Name
    tumor protein D52-like 2
  • Synonyms
    2810411G23Rik, D54
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913564
    NCBI Gene: 66314
  • Gene Overview
    MyGene.info: TPD52L2
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:181497142-181517966 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 103.63 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    91 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913564
protein coding gene Chr2:181497104-181517966 (.)
129S1/SvImJ MGP_129S1SvImJ_G0027026
protein coding gene Chr2:188094724-188118661 (+)
A/J MGP_AJ_G0026992
protein coding gene Chr2:180348141-180369052 (+)
AKR/J MGP_AKRJ_G0026962
protein coding gene Chr2:185758374-185779339 (+)
BALB/cJ MGP_BALBcJ_G0027000
protein coding gene Chr2:180827761-180848552 (+)
C3H/HeJ MGP_C3HHeJ_G0026742
protein coding gene Chr2:186108515-186129324 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027446
protein coding gene Chr2:193543092-193569296 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024810
protein coding gene Chr2:171035367-171056096 (+)
CAST/EiJ MGP_CASTEiJ_G0026201
protein coding gene Chr2:184372000-184394852 (+)
CBA/J MGP_CBAJ_G0026719
protein coding gene Chr2:200542376-200563176 (+)
DBA/2J MGP_DBA2J_G0026856
protein coding gene Chr2:179448086-179468856 (+)
FVB/NJ MGP_FVBNJ_G0026822
protein coding gene Chr2:178064477-178086270 (+)
LP/J MGP_LPJ_G0026958
protein coding gene Chr2:188119844-188140740 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026842
protein coding gene Chr2:203106390-203128045 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027506
protein coding gene Chr2:185725589-185746601 (+)
PWK/PhJ MGP_PWKPhJ_G0025937
protein coding gene Chr2:176973153-176994054 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025737
protein coding gene Chr2:182226370-182247187 (+)
WSB/EiJ MGP_WSBEiJ_G0026273
protein coding gene Chr2:186712401-186733340 (+)



Homology
more
  • Human Ortholog
    TPD52L2, TPD52 like 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TPD52L2, TPD52 like 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    D54, TPD54
  • Links
    NCBI Gene ID: 7165
    neXtProt AC: NX_O43399
    UniProt: O43399

  • Chr Location
    20q13.33; chr20:63865228-63891545 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Female mice homozygous for a knock-out allele exhibit decreased body length and absent or minimal hepatic lipidosis.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000000827 Ensembl Gene Model | MGI Sequence Detail 20825 C57BL/6J ±  kb
transcript ENSMUST00000108799 Ensembl | MGI Sequence Detail 985 Not Applicable  
polypeptide ENSMUSP00000104427 Ensembl | MGI Sequence Detail 229 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    9 Sequences
  • InterPro Domains
    IPR007327 Tumour protein D52
Molecular
Reagents
less
  • All nucleic 19
    cDNA 19

    Microarray probesets 6
Other
Accession IDs
less
MGI:2139162, MGI:2139523
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:213427 Adissu HA, et al., Histopathology reveals correlative and unique phenotypes in a high-throughput mouse phenotyping screen. Dis Model Mech. 2014 May;7(5):515-24

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory