Dpy30
Gene Detail

Symbol

Name
ID

Dpy30
dpy-30 homolog (C. elegans)
MGI:1913560

Synonyms

2810410M20Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 17
45.64 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr17:74299474-74323944 bp, - strand From NCBI annotation of GRCm38   24471 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:32582  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Dpy30

Human
homologs

Human Homolog		DPY30, dpy-30 homolog (C. elegans)
NCBI Gene ID		84661
neXtProt AC		NX_Q9C005
Human Synonyms		Cps25, HDPY-30, Saf19
Human Chr (Location)		2p22.3; chr2:32023422-32039822 (-)  GRCh38

Mutations,
alleles, and
phenotypes

All mutations/alleles(147) : Gene trapped(145) Targeted(2)
Incidental mutations (data from APF )

Interactions

Dpy30 interacts with 78 markers (Mir7-1, Mir9-1, Mir9-2, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (13 annotations)

Process	chromatin modification, endosomal transport, ...
Component	Golgi apparatus, histone methyltransferase complex, ...
Function	identical protein binding, protein homodimerization activity

External Resources: FuncBase

Expression

Literature Summary: (1 records)

Data Summary: Results (122)    Tissues (16)    Images (23)    Tissue x Stage Matrix (view)

Assay Type	Results
RNA in situ	122

cDNA source data(82)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(82) cDNA(82)
Microarray probesets(3)

Other database
links

Ensembl Gene Model	ENSMUSG00000024067 (Evidence)
Entrez Gene	66310 (Evidence)
UniGene	28536
DFCI	TC1671343, TC1591976, TC1575027
DoTS	DT.101706135, DT.101386361, DT.494942
NIA Mouse Gene Index	U038053
Consensus CDS Project	CCDS28970.1
International Mouse Knockout Project Status	Dpy30

Sequences

Length	Strain/Species
genomic	66310	NCBI Gene Model | MGI Sequence Detail	24471	C57BL/6J
transcript	NM_024428	RefSeq | MGI Sequence Detail	799	C57BL/6
polypeptide	Q99LT0	UniProt | EBI | MGI Sequence Detail	99	Not Applicable

All sequences(37) RefSeq(8) UniProt(2)

Polymorphisms

SNPs within 2kb(142 from dbSNP Build 137)

Protein-related
information

Resource	ID	Description
InterPro	IPR007858	Dpy-30 motif
Protein Ontology	PR:000006677	protein dpy-30

Graphical View of Protein Domain Structure

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)

Other
accession IDs

MGI:2147150