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Fam53c Gene Detail
Summary
  • Symbol
    Fam53c
  • Name
    family with sequence similarity 53, member C
  • Synonyms
    2810012G03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913556
    NCBI Gene: 66306
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:34758906-34773760 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 18.72 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913556
protein coding gene Chr18:34758830-34773760 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024250
protein coding gene Chr18:32993399-33008239 (+)
A/J MGP_AJ_G0024216
protein coding gene Chr18:31873844-31888698 (+)
AKR/J MGP_AKRJ_G0024184
protein coding gene Chr18:32793850-32808579 (+)
BALB/cJ MGP_BALBcJ_G0024216
protein coding gene Chr18:31933421-31948171 (+)
C3H/HeJ MGP_C3HHeJ_G0023983
protein coding gene Chr18:32805819-32820664 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024658
protein coding gene Chr18:34263414-34278324 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022098
protein coding gene Chr18:32016610-32031142 (+)
CAST/EiJ MGP_CASTEiJ_G0023458
protein coding gene Chr18:32758951-32773658 (+)
CBA/J MGP_CBAJ_G0023951
protein coding gene Chr18:35191664-35206520 (+)
DBA/2J MGP_DBA2J_G0024083
protein coding gene Chr18:31530505-31545357 (+)
FVB/NJ MGP_FVBNJ_G0024050
protein coding gene Chr18:31214893-31229721 (+)
LP/J MGP_LPJ_G0024165
protein coding gene Chr18:33073580-33089534 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024078
protein coding gene Chr18:36454401-36469246 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024706
protein coding gene Chr18:32609459-32624301 (+)
PWK/PhJ MGP_PWKPhJ_G0023202
protein coding gene Chr18:31733189-31747965 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023010
protein coding gene Chr18:32886736-32901634 (+)
WSB/EiJ MGP_WSBEiJ_G0023521
protein coding gene Chr18:32541980-32556820 (+)



Homology
more
  • Human Ortholog
    FAM53C, family with sequence similarity 53 member C
  • Vertebrate Orthologs
    9
  • Human Ortholog
    FAM53C, family with sequence similarity 53 member C
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C5orf6
  • Links
    NCBI Gene ID: 51307
    neXtProt AC: NX_Q9NYF3
    UniProt: Q9NYF3

  • Chr Location
    5q31.2; chr5:138337535-138349729 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034300 Ensembl Gene Model | MGI Sequence Detail 14855 C57BL/6J ±  kb
transcript ENSMUST00000097622 Ensembl | MGI Sequence Detail 4256 Not Applicable  
polypeptide ENSMUSP00000095226 Ensembl | MGI Sequence Detail 393 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 128
    cDNA 128

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory