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Smim8 Gene Detail
Summary
  • Symbol
    Smim8
  • Name
    small integral membrane protein 8
  • Synonyms
    1810030N24Rik, 2810406B13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913541
    NCBI Gene: 66291
Location & Maps
more
  • Sequence Map
    Chr4:34768664-34778423 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      9760 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 16.86 cM, cytoband A5
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SMIM8, small integral membrane protein 8
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SMIM8, small integral membrane protein 8
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C6orf162, dJ102H19.2
  • Links
    NCBI Gene ID: 57150
    neXtProt AC: NX_Q96KF7

  • Chr Location
    6q15; chr6:87322588-87342328 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 10708
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: SMIM8
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    148
  • Chemically and radiation induced
    1
  • Gene trapped
    142
  • Targeted
    5
  • Genomic Mutations
    1 involving Smim8
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006463 VEGA Gene Model | MGI Sequence Detail 9760 C57BL/6J ±  kb
transcript OTTMUST00000014780 VEGA | MGI Sequence Detail 782 Not Applicable  
polypeptide OTTMUSP00000006871 VEGA | MGI Sequence Detail 97 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    74 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR026686 UPF0708 protein C6orf162
Molecular
Reagents
less
  • All nucleic 42
    cDNA 42

    Microarray probesets 3
Other
Accession IDs
less
MGI:1917441
References
more
  • Summaries
    All 29
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory