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Smim20 Gene Detail
Summary
  • Symbol
    Smim20
  • Name
    small integral membrane protein 20
  • Synonyms
    1110067B18Rik, 1810013D10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913528
    NCBI Gene: 66278
  • Gene Overview
    MyGene.info: SMIM20
Location & Maps
more
  • Sequence Map
    Chr5:53267083-53278540 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      11458 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 29.05 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SMIM20, small integral membrane protein 20
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SMIM20, small integral membrane protein 20
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C4orf52
  • Links
    NCBI Gene ID: 389203
    neXtProt AC: NX_Q8N5G0

  • Chr Location
    4p15.2; chr4:25914192-25929879 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    18 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Smim20
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029648 VEGA Gene Model | MGI Sequence Detail 11458 C57BL/6J ±  kb
transcript OTTMUST00000073543 VEGA | MGI Sequence Detail 922 Not Applicable  
polypeptide OTTMUSP00000038087 VEGA | MGI Sequence Detail 69 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    98 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027917 Protein of unknown function DUF4538
Molecular
Reagents
less
  • All nucleic 9
    Genomic 1
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:1919046, MGI:2141348
References
more
  • Summaries
    All 18
    Phenotypes 18
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory