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Lyrm9 Gene Detail
Summary
  • Symbol
    Lyrm9
  • Name
    LYR motif containing 9
  • Synonyms
    1810012P15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913524
    NCBI Gene: 66274
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:78717421-78734725 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 46.74 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    91 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913524
 protein coding gene Chr11:78717410-78737696 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018790
 protein coding gene Chr11:79873561-79895485 (+)
A/J MGP_AJ_G0018757
 protein coding gene Chr11:76809389-76829665 (+)
AKR/J MGP_AKRJ_G0018727
 protein coding gene Chr11:79111135-79132859 (+)
BALB/cJ MGP_BALBcJ_G0018730
 protein coding gene Chr11:77221100-77241401 (+)
C3H/HeJ MGP_C3HHeJ_G0018544
 protein coding gene Chr11:79163822-79184224 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019182
 protein coding gene Chr11:82336807-82359221 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016817
 protein coding gene Chr11:73771288-73792345 (+)
CAST/EiJ MGP_CASTEiJ_G0018099
 protein coding gene Chr11:79618901-79641298 (+)
CBA/J MGP_CBAJ_G0018515
 protein coding gene Chr11:85937834-85958122 (+)
DBA/2J MGP_DBA2J_G0018623
 protein coding gene Chr11:76377763-76398525 (+)
FVB/NJ MGP_FVBNJ_G0018612
 protein coding gene Chr11:75971452-75991769 (+)
LP/J MGP_LPJ_G0018693
 protein coding gene Chr11:80394164-80416124 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018639
 protein coding gene Chr11:86311155-86331415 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019222
 protein coding gene Chr11:79372069-79393948 (+)
PWK/PhJ MGP_PWKPhJ_G0017869
 protein coding gene Chr11:77176173-77197567 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017660
 protein coding gene Chr11:78982259-79004813 (+)
WSB/EiJ MGP_WSBEiJ_G0018151
 protein coding gene Chr11:79199831-79220960 (+)



Homology
more
  • Human Ortholog
    LYRM9, LYR motif containing 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LYRM9, LYR motif containing 9
  • Synonyms
    C17orf108, HSD24
  • Links
    NCBI Gene ID: 201229
    neXtProt AC: NX_A8MSI8
    UniProt: A8MSI8

  • Chr Location
    17q11.2; chr17:27878314-27894752 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
  • All Mutations and Alleles
    19
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    14
  • Targeted
    3
  • Genomic Mutations
    2 involving Lyrm9
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    11 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66274 NCBI Gene Model | MGI Sequence Detail 17305 C57BL/6J ±  kb
transcript NM_001076681 RefSeq | MGI Sequence Detail 5053 C57BL/6  
polypeptide Q3UN90 UniProt | EBI | MGI Sequence Detail 78 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 33
    Phenotypes 14
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:274872 Ingham NJ, et al., Mouse screen reveals multiple new genes underlying mouse and human hearing loss. PLoS Biol. 2019 Apr;17(4):e3000194
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory