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Lyrm9 Gene Detail
Summary
  • Symbol
    Lyrm9
  • Name
    LYR motif containing 9
  • Synonyms
    1810012P15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913524
    NCBI Gene: 66274
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:78826595-78843899 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 46.74 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    91 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913524
protein coding gene Chr11:78826584-78846870 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018790
protein coding gene Chr11:79873561-79895485 (+)
A/J MGP_AJ_G0018757
protein coding gene Chr11:76809389-76829665 (+)
AKR/J MGP_AKRJ_G0018727
protein coding gene Chr11:79111135-79132859 (+)
BALB/cJ MGP_BALBcJ_G0018730
protein coding gene Chr11:77221100-77241401 (+)
C3H/HeJ MGP_C3HHeJ_G0018544
protein coding gene Chr11:79163822-79184224 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019182
protein coding gene Chr11:82336807-82359221 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016817
protein coding gene Chr11:73771288-73792345 (+)
CAST/EiJ MGP_CASTEiJ_G0018099
protein coding gene Chr11:79618901-79641298 (+)
CBA/J MGP_CBAJ_G0018515
protein coding gene Chr11:85937834-85958122 (+)
DBA/2J MGP_DBA2J_G0018623
protein coding gene Chr11:76377763-76398525 (+)
FVB/NJ MGP_FVBNJ_G0018612
protein coding gene Chr11:75971452-75991769 (+)
LP/J MGP_LPJ_G0018693
protein coding gene Chr11:80394164-80416124 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018639
protein coding gene Chr11:86311155-86331415 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019222
protein coding gene Chr11:79372069-79393948 (+)
PWK/PhJ MGP_PWKPhJ_G0017869
protein coding gene Chr11:77176173-77197567 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017660
protein coding gene Chr11:78982259-79004813 (+)
WSB/EiJ MGP_WSBEiJ_G0018151
protein coding gene Chr11:79199831-79220960 (+)



Homology
more
  • Human Ortholog
    LYRM9, LYR motif containing 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    LYRM9, LYR motif containing 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C17orf108, HSD24
  • Links
    NCBI Gene ID: 201229
    neXtProt AC: NX_A8MSI8
    UniProt: A8MSI8

  • Chr Location
    17q11.2; chr17:27878314-27893383 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 47720
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: LYRM9
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66274 NCBI Gene Model | MGI Sequence Detail 17305 C57BL/6J ±  kb
transcript NM_001076681 RefSeq | MGI Sequence Detail 5053 C57BL/6  
polypeptide Q3UN90 UniProt | EBI | MGI Sequence Detail 78 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR008011 Complex 1 LYR protein
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 30
    Phenotypes 13
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory